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AT4G36040.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Chaperone DnaJ-domain superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding, response to stress; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623); BEST Arabidopsis thaliana protein match is: Chaperone DnaJ-domain superfamily protein (TAIR:AT2G17880.1); Has 18528 Blast hits to 18528 proteins in 3080 species: Archae - 133; Bacteria - 8129; Metazoa - 2968; Fungi - 1612; Plants - 1794; Viruses - 5; Other Eukaryotes - 3887 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2214eggNOG:ENOG410IQSREMBL:AK226908EMBL:BT025620EnsemblPlants:AT4G36040EnsemblPlants:AT4G36040.1entrez:829760
ExpressionAtlas:Q1H544Gene3D:1.10.287.110GeneID:829760Gramene:AT4G36040.1hmmpanther:PTHR24078hmmpanther:PTHR24078:SF166InterPro:IPR001623
KEGG:ath:AT4G36040OMA:MARIPPPPfam:PF00226Pfam:Q9FYB5Pfscan:PS50076PhylomeDB:Q1H544PRINTS:PR00625
PROSITE:PS50076RefSeq:NP_195328.1SMART:SM00271SMR:Q1H544STRING:3702.AT4G36040.1SUPFAM:SSF46565TAIR:AT4G36040
UniGene:At.20876UniProt:Q1H544UniProt:Q9FYB5
Coordinates (TAIR10) chr4:-:17049708..17050193
Molecular Weight (calculated) 17823.00 Da
IEP (calculated) 9.20
GRAVY (calculated) -0.46
Length 161 amino acids
Sequence (TAIR10)
(BLAST)
001: MLSSSPTSFT HPFLSSSPPL SPISPPSRTA RISPPLVSAS CSYTYTEDSP RLHQIPRRLT TVPASLYDVL EVPLGATSQD IKSAYRRLAR ICHPDVAGTD
101: RTSSSSADEF MKIHAAYCTL SDPEKRSVYD RRMLRRSRPL TVGTSGLGSY VGRNWETDQC W
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)