AT4G30770.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:extracellular 0.926 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Putative membrane lipoprotein | ||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Putative membrane lipoprotein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein match is: Putative membrane lipoprotein (TAIR:AT5G17590.1); Has 36 Blast hits to 36 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:-:14986140..14986613 | ||||||||||||||||||||||||||||
Molecular Weight (calculated) | 17158.60 Da | ||||||||||||||||||||||||||||
IEP (calculated) | 4.42 | ||||||||||||||||||||||||||||
GRAVY (calculated) | 0.16 | ||||||||||||||||||||||||||||
Length | 157 amino acids | ||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MPVPDPRAGQ AFICLITLFL FLSIAVGGGC LIAYTILPYP PVWLSYLGIV FVCLPWFFWI LTFAYRIVSR TFGFRMVVGS GGNNNNANGE TMTRDLDPPE 101: QSLESPDDDD PEPIAHPQGQ VLVSIEGNQS KKRMSTSSNS TIASHESEMP LAISMAS |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)