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AT4G10440.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.551
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT1G33170.1); Has 1162 Blast hits to 1152 proteins in 127 species: Archae - 5; Bacteria - 186; Metazoa - 0; Fungi - 2; Plants - 957; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Protein Annotations
EC:2.1.1.-eggNOG:ENOG410IIY2eggNOG:ENOG410Y9NVEMBL:AL049524
EMBL:AL161517EMBL:CP002687EnsemblPlants:AT4G10440EnsemblPlants:AT4G10440.1
entrez:826636Gene3D:3.40.50.150GeneID:826636Genevisible:Q9SZX8
GO:GO:0005789GO:GO:0008168GO:GO:0016021Gramene:AT4G10440.1
hmmpanther:PTHR10108hmmpanther:PTHR10108:SF753HOGENOM:HOG000238541InParanoid:Q9SZX8
InterPro:IPR004159InterPro:IPR029063KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-
KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00624+2.1.1.-
KEGG:00627+2.1.1.-KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-
KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-KEGG:00981+2.1.1.-
KEGG:ath:AT4G10440OMA:HIRCVESPaxDb:Q9SZX8Pfam:PF03141
Pfam:Q9SZX8PhylomeDB:Q9SZX8PIR:T04179PRIDE:Q9SZX8
PRO:PR:Q9SZX8ProteinModelPortal:Q9SZX8Proteomes:UP000006548RefSeq:NP_192782.1
SMR:Q9SZX8SUPFAM:SSF53335TAIR:AT4G10440TMHMM:TMhelix
UniGene:At.54257UniProt:Q9SZX8
Coordinates (TAIR10) chr4:-:6459728..6461932
Molecular Weight (calculated) 72391.20 Da
IEP (calculated) 7.30
GRAVY (calculated) -0.57
Length 633 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKENSGHHH QTEARRKKLT LILGVSGLCI LFYVLGAWQA NTVPSSISKL GCETQSNPSS SSSSSSSSES AELDFKSHNQ IELKETNQTI KYFEPCELSL
101: SEYTPCEDRQ RGRRFDRNMM KYRERHCPVK DELLYCLIPP PPNYKIPFKW PQSRDYAWYD NIPHKELSVE KAVQNWIQVE GDRFRFPGGG TMFPRGADAY
201: IDDIARLIPL TDGGIRTAID TGCGVASFGA YLLKRDIMAV SFAPRDTHEA QVQFALERGV PAIIGIMGSR RLPYPARAFD LAHCSRCLIP WFKNDGLYLM
301: EVDRVLRPGG YWILSGPPIN WKQYWRGWER TEEDLKKEQD SIEDVAKSLC WKKVTEKGDL SIWQKPLNHI ECKKLKQNNK SPPICSSDNA DSAWYKDLET
401: CITPLPETNN PDDSAGGALE DWPDRAFAVP PRIIRGTIPE MNAEKFREDN EVWKERIAHY KKIVPELSHG RFRNIMDMNA FLGGFAASML KYPSWVMNVV
501: PVDAEKQTLG VIYERGLIGT YQDWCEGFST YPRTYDMIHA GGLFSLYEHR CDLTLILLEM DRILRPEGTV VLRDNVETLN KVEKIVKGMK WKSQIVDHEK
601: GPFNPEKILV AVKTYWTGQP SDKNNNNNNN NNN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)