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AT3G49630.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.398
vacuole 0.336
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: aging, cellular response to starvation; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root, carpel; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT3G49620.1); Has 8411 Blast hits to 8374 proteins in 969 species: Archae - 0; Bacteria - 1106; Metazoa - 103; Fungi - 1039; Plants - 4642; Viruses - 0; Other Eukaryotes - 1521 (source: NCBI BLink).
Protein Annotations
EC:1.14.11.-eggNOG:COG3491eggNOG:KOG0143EMBL:AL132964
EMBL:CP002686EnsemblPlants:AT3G49630EnsemblPlants:AT3G49630.1entrez:824125
Gene3D:2.60.120.330GeneID:824125Genevisible:F4IY03GO:GO:0005506
GO:GO:0051213Gramene:AT3G49630.1gramene_pathway:1.14.11.23gramene_pathway:PWY-3101
hmmpanther:PTHR10209hmmpanther:PTHR10209:SF144HOGENOM:HOG000276736InParanoid:F4IY03
InterPro:IPR002283InterPro:IPR005123InterPro:IPR026992InterPro:IPR027443
KEGG:ath:AT3G49630OMA:FWIMRILPaxDb:F4IY03Pfam:F4IY03
Pfam:PF03171Pfam:PF14226Pfscan:PS51471PIR:T46240
PRIDE:F4IY03PRINTS:PR00682PRO:PR:F4IY03PROSITE:PS51471
ProteinModelPortal:F4IY03Proteomes:UP000006548RefSeq:NP_190532.2SMR:F4IY03
SUPFAM:SSF51197TAIR:AT3G49630UniGene:At.53858UniProt:F4IY03
Coordinates (TAIR10) chr3:+:18397759..18400255
Molecular Weight (calculated) 37458.10 Da
IEP (calculated) 5.84
GRAVY (calculated) -0.22
Length 332 amino acids
Sequence (TAIR10)
(BLAST)
001: MATNFKSLLP VIDISPLVVK CDDANMAEDA GVAEVVGKLD RACRDAGFFY VIGHGISEDF IRKVRVMSHQ FFELPYEEKL KIKITPAAGY RGYQRIGLNL
101: TNGKQDMHEA IDCYKEFKQG KHGDIGKVME GANQWPENPQ EYKELMEEYI KLCIDLSRNI LRGISLALGG SPYEFEGKML TDPFWIMRIL GYPGVNQENV
201: IGCGAHTDYG LLSLINQDDD KTALQVRDLA GDWIPVIPIP GSFVCNIGDM LKILSNGVYE STLHRVINNS PRYRVCVGFF YETNFDAAVE PLDIFKEKYP
301: GKGTSQVFKR VVYGEHLVHK LQTTFQNLVE HS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)