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AT3G44780.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.737
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cysteine proteinases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cysteine proteinases superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: sperm cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19515.2); Has 19 Blast hits to 19 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JTZGeggNOG:ENOG41107CYEMBL:CP002686EnsemblPlants:AT3G44780EnsemblPlants:AT3G44780.1entrez:823609GeneID:823609
GO:GO:0009507Gramene:AT3G44780.1InParanoid:F4J496KEGG:ath:AT3G44780OMA:DICWAIVPaxDb:F4J496ProteinModelPortal:F4J496
Proteomes:UP000006548RefSeq:NP_190064.1SUPFAM:SSF54001TAIR:AT3G44780UniGene:At.53733UniProt:F4J496
Coordinates (TAIR10) chr3:-:16321624..16322604
Molecular Weight (calculated) 24004.40 Da
IEP (calculated) 8.89
GRAVY (calculated) -0.30
Length 207 amino acids
Sequence (TAIR10)
(BLAST)
001: MEELPIKVEI LYESDQLFSE LKKIGQYIPL STFLEILKLK LDGKFEILRV KNKVVKPKVE GETIDVVYTR LRKHQVLPDE TKKADWGPFN GPMKDQGEHD
101: ICWAIVTAEL VTAIRWIKQH ENGTEYLYQE LVDFVFPEKG KLQKNKAHFC YKLSIVKALR YVVRQGIQKA LDRPFDGCKE FPPPRVLSNS HLGGYICAAK
201: LIQHCYL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)