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AT3G29260.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.981
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : NAD(P)-binding Rossmann-fold superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Polyketide synthase/Fatty acid synthase, KR (InterPro:IPR020842), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G29250.2); Has 121532 Blast hits to 121322 proteins in 3599 species: Archae - 968; Bacteria - 79769; Metazoa - 5266; Fungi - 6735; Plants - 2668; Viruses - 7; Other Eukaryotes - 26119 (source: NCBI BLink).
Protein Annotations
EC:1.1.1.-eggNOG:COG1028eggNOG:KOG0725EMBL:AB026657
EMBL:CP002686EnsemblPlants:AT3G29260EnsemblPlants:AT3G29260.1entrez:822582
Gene3D:3.40.50.720GeneID:822582Genevisible:F4J300GO:GO:0016491
Gramene:AT3G29260.1hmmpanther:PTHR24322hmmpanther:PTHR24322:SF498InParanoid:F4J300
InterPro:IPR002347InterPro:IPR016040KEGG:ath:AT3G29260OMA:MASNVKS
PANTHER:PTHR24322PaxDb:F4J300Pfam:F4J300Pfam:PF00106
PRIDE:F4J300PRINTS:PR00080PRINTS:PR00081PRO:PR:F4J300
ProteinModelPortal:F4J300Proteomes:UP000006548Reactome:R-ATH-2142700Reactome:R-ATH-70895
RefSeq:NP_189571.1SMR:F4J300STRING:3702.AT3G29260.1SUPFAM:SSF51735
TAIR:AT3G29260UniGene:At.64139UniProt:F4J300
Coordinates (TAIR10) chr3:-:11215952..11216834
Molecular Weight (calculated) 26926.20 Da
IEP (calculated) 6.15
GRAVY (calculated) 0.17
Length 259 amino acids
Sequence (TAIR10)
(BLAST)
001: MSGQRLDGKI VIITGGASGI GAEAARLFTD HGAKVVIVDL QEELGQNVAV SIGLDKASFY RCDITDETEV ENAVKFTVEK HGKLDVLFSN AGVMEPHGSI
101: LDLDLEAFDR TMAVNVRGAA AFIKHAARSM VASGTRGSIV CTTSVTAEIG GPGPHSYTAS KHALLGLVRS ACGGLGKYGI RVNGVAPYGV ATGLTSYNEE
201: TVKMVEDYCS ATAILKGVVL KARHVADAAL FLASDDSVYI SGQNLGVDGG YSVVKLTSN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)