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AT3G12580.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.934
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:22522809 (2012): cytosol cytosolic ribosomes
  • PMID:22430844 (2012): Golgi
  • PMID:22215637 (2012): plasma membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:21166475 (2011): cytosol
  • PMID:19334764 (2009): plasma membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:17137349 (2006): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : heat shock protein 70
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
heat shock protein 70 (HSP70); FUNCTIONS IN: ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: heat shock cognate protein 70-1 (TAIR:AT5G02500.1); Has 34126 Blast hits to 33731 proteins in 4830 species: Archae - 159; Bacteria - 16481; Metazoa - 3906; Fungi - 1752; Plants - 1258; Viruses - 310; Other Eukaryotes - 10260 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-333-MONOMERBioGrid:5772eggNOG:COG0443eggNOG:KOG0101EMBL:AC069474EMBL:AJ002551EMBL:AP002055
EMBL:AY054183EMBL:AY054190EMBL:AY059885EMBL:CP002686EnsemblPlants:AT3G12580EnsemblPlants:AT3G12580.1entrez:820438
Gene3D:1.20.1270.10Gene3D:2.60.34.10GeneID:820438Genevisible:Q9LHA8GO:GO:0005524GO:GO:0005618GO:GO:0005634
GO:GO:0005739GO:GO:0005774GO:GO:0005794GO:GO:0005829GO:GO:0005886GO:GO:0006351GO:GO:0006355
GO:GO:0009266GO:GO:0009408GO:GO:0009615GO:GO:0009617GO:GO:0009644GO:GO:0016567GO:GO:0031625
GO:GO:0042542GO:GO:0046686GO:GO:0048046Gramene:AT3G12580.1hmmpanther:PTHR19375hmmpanther:PTHR19375:SF232HOGENOM:HOG000228135
InParanoid:Q9LHA8IntAct:Q9LHA8InterPro:IPR013126InterPro:IPR018181InterPro:IPR029047InterPro:IPR029048iPTMnet:Q9LHA8
KEGG:ath:AT3G12580KO:K03283MINT:MINT-2584399ncoils:CoilOMA:GENKIFTPaxDb:Q9LHA8Pfam:PF00012
Pfam:Q9LHA8PhylomeDB:Q9LHA8PIR:JA0171PRIDE:Q9LHA8PRINTS:PR00301PRO:PR:Q9LHA8PROSITE:PS00297
PROSITE:PS00329PROSITE:PS01036ProteinModelPortal:Q9LHA8Proteomes:UP000006548Reactome:R-ATH-3371453Reactome:R-ATH-3371568Reactome:R-ATH-3371571
Reactome:R-ATH-72163RefSeq:NP_187864.1scanprosite:PS00297scanprosite:PS00329scanprosite:PS01036SMR:Q9LHA8STRING:3702.AT3G12580.1
SUPFAM:SSF100920SUPFAM:SSF100934SUPFAM:SSF53067TAIR:AT3G12580tair10-symbols:ATHSP70tair10-symbols:HSP70UniGene:At.47608
UniProt:Q9LHA8
Coordinates (TAIR10) chr3:-:3991487..3993689
Molecular Weight (calculated) 71105.40 Da
IEP (calculated) 4.88
GRAVY (calculated) -0.43
Length 650 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVAFTDS ERLIGDAAKN QVAMNPTNTV FDAKRLIGRR YSDPSVQADK SHWPFKVVSG
101: PGEKPMIVVN HKGEEKQFSA EEISSMVLIK MREIAEAFLG SPVKNAVVTV PAYFNDSQRQ ATKDAGVISG LNVMRIINEP TAAAIAYGLD KKASSVGEKN
201: VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD NRMVNHFVQE FKRKNKKDIT GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLFEGIDFY
301: TTITRARFEE LNMDLFRKCM EPVEKCLRDA KMDKSSVHDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
401: DVTPLSLGLE TAGGVMTVLI PRNTTIPTKK EQIFSTYSDN QPGVLIQVYE GERARTKDNN LLGKFELSGI PPAPRGVPQI TVCFDIDANG ILNVSAEDKT
501: TGQKNKITIT NDKGRLSKEE IEKMVQEAEK YKAEDEEHKK KVDAKNALEN YAYNMRNTIK DEKIASKLDA ADKKKIEDAI DQAIEWLDGN QLAEADEFED
601: KMKELESLCN PIIARMYQGA GPDMGGAGGM DDDTPAGGSG GAGPKIEEVD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)