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AT3G09130.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.996
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G42786.1); Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
DNASU:820067EMBL:AC009326EMBL:CP002686EnsemblPlants:AT3G09130
EnsemblPlants:AT3G09130.1entrez:820067GeneID:820067Gramene:AT3G09130.1
HOGENOM:HOG000153531IntAct:Q9SS74KEGG:ath:AT3G09130OMA:TELYHIV
PhylomeDB:Q9SS74Proteomes:UP000006548RefSeq:NP_187525.1TAIR:AT3G09130
UniGene:At.53224UniProt:Q9SS74
Coordinates (TAIR10) chr3:+:2799312..2800505
Molecular Weight (calculated) 44825.90 Da
IEP (calculated) 7.18
GRAVY (calculated) -0.21
Length 397 amino acids
Sequence (TAIR10)
(BLAST)
001: MPKHIIDEIE SLSLATGFIL KNGDFTEEKS LLVKPTMGGT WHWSPIKGLH SQDSIRKTRA YILQEIARMT IYPEAGVSPT LRRKKGIVIG VARAVSTELY
101: HIVENDLIEE EMDTAKLAVG YDGETIVIKN DVDSKWKEEL SKPLNLSETE NKVIQRLLLI SHGVIPLQGY SLVTTSHHYN DKSKRAFSAV ERQFFSRCDQ
201: LSWWKEDEEA LRDAMWHKAG HPVKISFKKE IACSITIKQS LANAGIGSVA CRLPATEDVV WKAEAYRNLL KTLSPIFDDE VKWEALDEML SYLNHFSAAR
301: PTEVVTVHNA PTHLMSLDTR EKVVTWIAQW CSQNAEKVAI CLGFHTALLE NAGKFPGPSY SLMVLRTNVD SYILGTKLFS DYTVFKAKLR QLMDSVS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)