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AT2G02630.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.415
cytosol 0.323
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : Cysteine/Histidine-rich C1 domain family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cysteine/Histidine-rich C1 domain family protein; CONTAINS InterPro DOMAIN/s: DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G02610.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
EMBL:CP002685EnsemblPlants:AT2G02630EnsemblPlants:AT2G02630.1entrez:814792
GeneID:814792GO:GO:0008270GO:GO:0047134Gramene:AT2G02630.1
hmmpanther:PTHR32410hmmpanther:PTHR32410:SF152InParanoid:F4IR90InterPro:IPR004146
InterPro:IPR011424iPTMnet:F4IR90KEGG:ath:AT2G02630OMA:ICESKIV
PaxDb:F4IR90Pfam:PF03107Pfam:PF07649PRIDE:F4IR90
ProteinModelPortal:F4IR90Proteomes:UP000006548RefSeq:NP_178366.2SMR:F4IR90
STRING:3702.AT2G02630.1SUPFAM:SSF57889TAIR:AT2G02630UniGene:At.41474
UniProt:F4IR90
Coordinates (TAIR10) chr2:+:724163..725485
Molecular Weight (calculated) 50831.30 Da
IEP (calculated) 7.14
GRAVY (calculated) -0.16
Length 440 amino acids
Sequence (TAIR10)
(BLAST)
001: MHVFCAQMKI PFFIDQPKRH DHTLTLFPRQ ASLTCNICGL VNKLHLTYIC PICDFVAHSD CIYIPQTIRI SRHHHRVSFI SSLPFEEKSC GVCRQMLDSD
101: YGAYICKGCS GFVAHIRCAL RSDIWDGKEL EGVPEEVEED DVESFKRIAD GVILHFSHRH HLYFEISGVY NGNKFCQACA LPVNEGNLYV CVGCDFILHE
201: TCADAPRRKV HPLHPHPLKL IFYEDNCFHC KACWRTSTAF GYRCINHNCK YMIDIVCAST AEPFDYQGHR HPLFLSLDPK EKPMCHICRS TKDKKVLNCI
301: ECDFIVCFEC ATLPYMIRYK HDEHYLTFCH GDEASDSDWC ELCEGKLAIG GKEGFYECKD CCTTLHINCL LGPDPYLMVG QRLPVPNGEI FFRHNNYTTR
401: PFCSICNIRC PYPTFVSYIK DMFISYILCS SKHLKTRYHH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)