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AT1G76240.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Arabidopsis protein of unknown function (DUF241)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Arabidopsis protein of unknown function (DUF241); FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT2G17080.1); Has 409 Blast hits to 404 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 404; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IMUZeggNOG:ENOG410YQC3EMBL:AK228805EMBL:BT022064
EMBL:BT029223EMBL:CP002684EnsemblPlants:AT1G76240EnsemblPlants:AT1G76240.1
entrez:843957GeneID:843957Gramene:AT1G76240.1hmmpanther:PTHR33070
hmmpanther:PTHR33070:SF14InterPro:IPR004320KEGG:ath:AT1G76240ncoils:Coil
OMA:MMELENSPfam:PF03087Proteomes:UP000006548RefSeq:NP_177751.1
TAIR:AT1G76240UniGene:At.16588UniProt:Q501A3
Coordinates (TAIR10) chr1:-:28602949..28603875
Molecular Weight (calculated) 34884.10 Da
IEP (calculated) 9.89
GRAVY (calculated) -0.34
Length 308 amino acids
Sequence (TAIR10)
(BLAST)
001: MVGVFRRSLS FPNKPCGRSS PSSKPRVSHH TRSISLPCRS HPLISHVNHE ISQLKSWFSF AGETHSRTTS WITDGLSLLK DVQETLADIL QLPQSQESLR
101: NRPVFFENLL EDLLRFVDAY GIFRTSILCL REHQSAAQVA LRKKDDEKIA SYLKSRRSLA RDIAKLTSSI REPKTKHQHC HVDNVNGTYG DAELASVIGD
201: VIEVTVLVSV ALFNGVYLSL RATKTTPFIG FLKRSEKKEK LDEGIVELKQ VEEKSLIGLS KKKNEEVKSL MKRMMELENS IREIECESEK VFRGLISTRV
301: SLLNALTH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)