AT1G73160.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plastid 0.999 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : UDP-Glycosyltransferase superfamily protein | ||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G19460.1); Has 13084 Blast hits to 13074 proteins in 2221 species: Archae - 678; Bacteria - 10413; Metazoa - 93; Fungi - 132; Plants - 161; Viruses - 0; Other Eukaryotes - 1607 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:+:27506534..27507994 | ||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 55151.90 Da | ||||||||||||||||||||||||||||||||
IEP (calculated) | 8.43 | ||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||
Length | 486 amino acids | ||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAFKNHSSRT TLSSSSSTSF SFRFTTIITL AFIFCSSYYI FFSQFDYSPV TSSPENPPFA GDLRDLTFPW NKLSLGPISE KLKLAVFCKS WPVGSIPGGM 101: ERHAYTLYTS LASRGHEIHV FTVSSDRSNR EEYYNKGDLH VYFAPNEHGS LNHSRAFEIF HKINSLDHHS FDYVHTESVS LPHWRVKMVP NGDIAVTWHG 201: IWYEIMHSNL FQELSNDRPS SDLQQTMPRL VDEIRFFPKY KQHICISNSA REVLVNIYQL PKRKVHVIVN GVDQTKFVYS PESGARFRAK HGIPDNGTYI 301: VMGVSGRLVR DKGHPLLYEA FALLVKMHPK VYLLVAGSGP WGKRYAELGE NVRVLGALEP EELSGFYNAL DVFVNPTLRP QGLDLTIIEA MQCGKPVVAP 401: NYPSIVGTVV VDERFGYTFS PNVRSLVETL DSVVRDGPRV LEMKGIACKG YALSMFTATQ MASAYERFFM CMKNERYCRY PLSTDN |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)