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AT1G64750.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : deletion of SUV3 suppressor 1(I)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
deletion of SUV3 suppressor 1(I) (DSS1(I)); CONTAINS InterPro DOMAIN/s: DSS1/SEM1 (InterPro:IPR007834); BEST Arabidopsis thaliana protein match is: DSS1 homolog on chromosome V (TAIR:AT5G45010.1); Has 305 Blast hits to 305 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 134; Fungi - 77; Plants - 68; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Protein Annotations
BioGrid:28004EMBL:AC006193EMBL:AY065373EMBL:AY085437
EMBL:AY096483EMBL:CP002684EnsemblPlants:AT1G64750EnsemblPlants:AT1G64750.1
EnsemblPlants:AT1G64750.2entrez:842783ExpressionAtlas:Q9XIR8GeneID:842783
Genevisible:Q9XIR8GO:GO:0006406GO:GO:0008541GO:GO:0043248
hmmpanther:PTHR16771hmmpanther:PTHR16771:SF1HOGENOM:HOG000077585InParanoid:Q9XIR8
IntAct:Q9XIR8InterPro:IPR007834iPTMnet:Q9XIR8Pfam:PF05160
Pfam:Q9XIR8PhylomeDB:Q9XIR8PIR:F96670PRIDE:Q9XIR8
PRO:PR:Q9XIR8ProteinModelPortal:Q9XIR8Proteomes:UP000006548RefSeq:NP_564839.1
RefSeq:NP_974090.1SMART:SM01385SMR:Q9XIR8TAIR:AT1G64750
tair10-symbols:ATDSS1(I)tair10-symbols:DSS1(I)UniGene:At.27012UniProt:Q2PDG5
UniProt:Q9XIR8
Coordinates (TAIR10) chr1:-:24052787..24053712
Molecular Weight (calculated) 8859.76 Da
IEP (calculated) 3.68
GRAVY (calculated) -1.38
Length 74 amino acids
Sequence (TAIR10)
(BLAST)
1: MAAEPKAATA EVVKMDLFED DDEFEEFEIN EDWLEKEEVK EVSQQWEDDW DDDDVNDDFS RQLRKELENG TDKK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)