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AT1G03430.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.661
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : histidine-containing phosphotransfer factor 5
Curator
Summary (TAIR10)
Encodes AHP5, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).
Computational
Description (TAIR10)
histidine-containing phosphotransfer factor 5 (AHP5); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (InterPro:IPR008207); BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransmitter 2 (TAIR:AT3G29350.1); Has 311 Blast hits to 310 proteins in 49 species: Archae - 2; Bacteria - 33; Metazoa - 0; Fungi - 8; Plants - 266; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2198eggNOG:KOG4747EMBL:AK176256EMBL:AK176767
EMBL:BT030604EnsemblPlants:AT1G03430EnsemblPlants:AT1G03430.1entrez:839506
Gene3D:1.20.120.160GeneID:839506GO:GO:0000160GO:GO:0004871
GO:GO:0005622Gramene:AT1G03430.1hmmpanther:PTHR28242hmmpanther:PTHR28242:SF9
InterPro:IPR008207KEGG:ath:AT1G03430KO:K14490OMA:CISFKEC
Pfam:PF01627Pfam:Q8L9T7Pfscan:PS50894PROSITE:PS50894
RefSeq:NP_563684.1STRING:3702.AT1G03430.1SUPFAM:SSF47226TAIR:AT1G03430
tair10-symbols:AHP5UniGene:At.1207UniProt:Q67XQ1UniProt:Q8L9T7
Coordinates (TAIR10) chr1:+:848159..849235
Molecular Weight (calculated) 17926.40 Da
IEP (calculated) 4.77
GRAVY (calculated) -0.31
Length 157 amino acids
Sequence (TAIR10)
(BLAST)
001: MNTIVVAQLQ RQFQDYIVSL YQQGFLDNQF SELRKLQDEG TPDFVAEVVS LFFDDCSKLI NTMSISLERP DNVDFKQVDS GVHQLKGSSS SVGARRVKNV
101: CISFKECCDV QNREGCLRCL QQVDYEYKML KTKLQDLFNL EKQILQAGGT IPQVDIN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)