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AT5G64040.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)
Curator
Summary (TAIR10)
Encodes the only subunit of photosystem I located entirely in the thylakoid lumen. May be involved in the interaction between plastocyanin and the photosystem I complex.
Computational
Description (TAIR10)
PSAN; FUNCTIONS IN: calmodulin binding; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem I reaction centre subunit N (InterPro:IPR008796); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:MONOMER-1095BioGrid:21767eggNOG:ENOG410IY0SeggNOG:ENOG411281Y
EMBL:AB008266EMBL:AY062835EMBL:AY081594EMBL:CP002688
EMBL:U32176EnsemblPlants:AT5G64040EnsemblPlants:AT5G64040.1entrez:836525
ExpressionAtlas:P49107Gene3D:4.10.1190.10GeneID:836525Genevisible:P49107
GO:GO:0009522GO:GO:0009535GO:GO:0015979hmmpanther:PTHR36814
hmmpanther:PTHR36814:SF1HOGENOM:HOG000012544InParanoid:P49107IntAct:P49107
InterPro:IPR008796iPTMnet:P49107MINT:MINT-119261PaxDb:P49107
Pfam:P49107Pfam:PF05479PhylomeDB:P49107PRIDE:P49107
PRO:PR:P49107ProteinModelPortal:P49107Proteomes:UP000006548RefSeq:NP_201209.1
SMR:P49107STRING:3702.AT5G64040.2TAIR:AT5G64040tair10-symbols:PSAN
UniGene:At.21476UniProt:P49107
Coordinates (TAIR10) chr5:-:25628724..25629409
Molecular Weight (calculated) 18430.00 Da
IEP (calculated) 9.28
GRAVY (calculated) -0.16
Length 171 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAMNSSVLT CSYAIAGSGS VELNQKVGLV NSSVGFGQKK QMIMPVIKAQ RVVGDDVDGS NGRRSAMVFL AATLFSTAAV SASANAGVID EYLERSKTNK
101: ELNDKKRLAT SGANFARAFT VQFGSCKFPE NFTGCQDLAK QKKVPFISED IALECEGKDK YKCGSNVFWK W
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)