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AT4G23740.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.926
What is SUBAcon?
What is ASURE?
SUBAcon computations
Predictors External Curations
AmiGO : plasma membrane 17317660
SwissProt : plasma membrane 16381842
TAIR : plasma membrane 17317660
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Leucine-rich repeat protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G64210.1); Has 133447 Blast hits to 93425 proteins in 3201 species: Archae - 108; Bacteria - 9755; Metazoa - 33158; Fungi - 5971; Plants - 69957; Viruses - 278; Other Eukaryotes - 14220 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G23740-MONOMERBioGrid:13763eggNOG:ENOG410IGYXeggNOG:ENOG410YDXUEMBL:AK118364EMBL:AL035394EMBL:AL161560
EMBL:BT008579EMBL:CP002687EnsemblPlants:AT4G23740EnsemblPlants:AT4G23740.1entrez:828474ExpressionAtlas:Q9SUQ3Gene3D:2.60.120.200
Gene3D:3.80.10.10GeneID:828474Genevisible:Q9SUQ3GO:GO:0004672GO:GO:0005524GO:GO:0005886GO:GO:0016021
Gramene:AT4G23740.1hmmpanther:PTHR27008hmmpanther:PTHR27008:SF15HOGENOM:HOG000116554InParanoid:Q9SUQ3InterPro:IPR000719InterPro:IPR001611
InterPro:IPR011009InterPro:IPR013210InterPro:IPR013320InterPro:IPR017441InterPro:IPR032675iPTMnet:Q9SUQ3KEGG:ath:AT4G23740
OMA:RIHRENNPaxDb:Q9SUQ3Pfam:PF00069Pfam:PF08263Pfam:PF13855Pfam:Q9SUQ3Pfscan:PS50011
Pfscan:PS51450PhylomeDB:Q9SUQ3PIR:T05606PRIDE:Q9SUQ3PRO:PR:Q9SUQ3PROSITE:PS00107PROSITE:PS50011
PROSITE:PS51450ProteinModelPortal:Q9SUQ3Proteomes:UP000006548RefSeq:NP_194105.1scanprosite:PS00107SMR:Q9SUQ3STRING:3702.AT4G23740.1
SUPFAM:SSF52058SUPFAM:SSF56112TAIR:AT4G23740TMHMM:TMhelixUniGene:At.27883UniProt:C0LGR2UniProt:Q9SUQ3
Coordinates (TAIR10) chr4:+:12367063..12369159
Molecular Weight (calculated) 70802.20 Da
IEP (calculated) 6.79
GRAVY (calculated) -0.13
Length 638 amino acids
Sequence (TAIR10)
(BLAST)
001: MEALRIYLWS LCLSLCLIIY GANSDPLEDK RALLEFLTIM QPTRSLNWNE TSQVCNIWTG VTCNQDGSRI IAVRLPGVGL NGQIPPNTIS RLSALRVLSL
101: RSNLISGEFP KDFVELKDLA FLYLQDNNLS GPLPLDFSVW KNLTSVNLSN NGFNGTIPSS LSRLKRIQSL NLANNTLSGD IPDLSVLSSL QHIDLSNNYD
201: LAGPIPDWLR RFPFSSYTGI DIIPPGGNYT LVTPPPPSEQ THQKPSKARF LGLSETVFLL IVIAVSIVVI TALAFVLTVC YVRRKLRRGD GVISDNKLQK
301: KGGMSPEKFV SRMEDVNNRL SFFEGCNYSF DLEDLLRASA EVLGKGTFGT TYKAVLEDAT SVAVKRLKDV AAGKRDFEQQ MEIIGGIKHE NVVELKAYYY
401: SKDEKLMVYD YFSRGSVASL LHGNRGENRI PLDWETRMKI AIGAAKGIAR IHKENNGKLV HGNIKSSNIF LNSESNGCVS DLGLTAVMSP LAPPISRQAG
501: YRAPEVTDTR KSSQLSDVYS FGVVLLELLT GKSPIHTTAG DEIIHLVRWV HSVVREEWTA EVFDIELLRY TNIEEEMVEM LQIAMSCVVK AADQRPKMSD
601: LVRLIENVGN RRTSIEPEPE LKPKSENGAS ETSTPSEI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)