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AT3G58810.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
vacuole 1.000
ASURE: vacuole
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:16709200 (2006): plant-type vacuole
  • PMID:15215502 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : metal tolerance protein A2
Curator
Summary (TAIR10)
Member of Zinc transporter (ZAT) family. Contributes to basic cellular Zn tolerance and controls Zn partitioning, particularly under conditions of high rates of Zn influx into the root symplasm. Localizes to the vacuolar membrane.
Computational
Description (TAIR10)
metal tolerance protein A2 (MTPA2); FUNCTIONS IN: efflux transmembrane transporter activity, zinc ion transmembrane transporter activity, inorganic anion transmembrane transporter activity; INVOLVED IN: response to zinc ion, zinc ion transport, detoxification of cobalt ion, detoxification of zinc ion; LOCATED IN: plant-type vacuole membrane, vacuole; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: zinc transporter of Arabidopsis thaliana (TAIR:AT2G46800.2); Has 9971 Blast hits to 8160 proteins in 2151 species: Archae - 138; Bacteria - 5614; Metazoa - 2175; Fungi - 680; Plants - 377; Viruses - 8; Other Eukaryotes - 979 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1230eggNOG:KOG1482EMBL:CP002686EnsemblPlants:AT3G58810EnsemblPlants:AT3G58810.1entrez:825050ExpressionAtlas:Q3EAH9
Gene3D:1.20.1510.10GeneID:825050GO:GO:0005385GO:GO:0005773GO:GO:0009705GO:GO:0010043GO:GO:0010312
GO:GO:0016021GO:GO:0061088GO:GO:0071577Gramene:AT3G58810.1hmmpanther:PTHR11562hmmpanther:PTHR11562:SF31HOGENOM:HOG000079023
InterPro:IPR002524InterPro:IPR027469KEGG:ath:AT3G58810KO:K14689OMA:VNIQGAYPANTHER:PTHR11562PaxDb:Q3EAH9
Pfam:PF01545PRIDE:Q3EAH9ProteinModelPortal:Q3EAH9Proteomes:UP000006548RefSeq:NP_191440.2SMR:Q3EAH9STRING:3702.AT3G58810.1
SUPFAM:0054606SUPFAM:SSF160240TAIR:AT3G58810tair10-symbols:ATMTP3tair10-symbols:ATMTPA2tair10-symbols:MTP3tair10-symbols:MTPA2
TIGRfam:TIGR01297TIGRFAMs:TIGR01297TMHMM:TMhelixUniProt:Q3EAH9
Coordinates (TAIR10) chr3:+:21750551..21751849
Molecular Weight (calculated) 47447.90 Da
IEP (calculated) 6.47
GRAVY (calculated) 0.32
Length 432 amino acids
Sequence (TAIR10)
(BLAST)
001: MVTPKLHLDL SLTKKVSYLF VSRQTLYRLS SSCLASLFLS FDAFLIARSC FFFQMKDHIH EHDHMVQICG EVSSGETSLV GIKKTCGEAP CGFSDAKTSS
101: IEAQERAASM RKLLIAVLLC AIFIVVEVVG GIKANSLAIL TDAAHLLSDV AAFAISLFSL WASGWKANPQ QSYGFFRIEI LGALVSIQMI WLLAGILVYE
201: AIVRLNNGSG EVEGSLMFAV SAVGLLVNIA MAILLGHDHG HGHGHSHDNG HGHSHDHGHG IAATEHHHDS GHDESQLSDV LIEQKKQRNV NIQGAYLHVL
301: GDSIQSVGVM IGGAIIWYKP EWKILDLICT LVFSVIVLGT TIGMLRNILE VLMESTPREI DPTMLEKGVC EIEEVVAVHE LHIWAITVGK LLLACHVKIR
401: PEAEADMVLD KIIDYIKREH NISHVTIQIE RQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)