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AT3G10410.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
vacuole 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Predictors External Curations
AmiGO : vacuole 20138839
SwissProt : extracellular 16381842
TAIR : vacuole 15215502
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23175753 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24393051 (2015): plant-type vacuole
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:21166475 (2011): cytosol
  • PMID:15539469 (2004): plant-type vacuole
  • PMID:15215502 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : SERINE CARBOXYPEPTIDASE-LIKE 49
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
SERINE CARBOXYPEPTIDASE-LIKE 49 (SCPL49); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 48 (TAIR:AT3G45010.1); Has 3569 Blast hits to 3439 proteins in 342 species: Archae - 0; Bacteria - 147; Metazoa - 678; Fungi - 883; Plants - 1454; Viruses - 0; Other Eukaryotes - 407 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G10410-MONOMEREC:3.4.16.-eggNOG:COG2939eggNOG:KOG1282EMBL:AC011560EMBL:AY091767EMBL:AY149954
EMBL:CP002686EMBL:M81130EMBL:Z25955EMBL:Z26528EnsemblPlants:AT3G10410EnsemblPlants:AT3G10410.1entrez:820205
ESTHER:arath-SCP49Gene3D:3.40.50.1820GeneID:820205Genevisible:P32826GO:GO:0004185GO:GO:0005576GO:GO:0005773
GO:GO:0005829GO:GO:0051603Gramene:AT3G10410.1HOGENOM:HOG000198296InParanoid:P32826InterPro:IPR001563InterPro:IPR018202
InterPro:IPR029058InterPro:IPR033124KEGG:ath:AT3G10410KO:K16298MEROPS:S10.A45OMA:CERLIQNPaxDb:P32826
Pfam:P32826Pfam:PF00450PhylomeDB:P32826PRIDE:P32826PRINTS:PR00724PRO:PR:P32826PROSITE:PS00131
PROSITE:PS00560ProteinModelPortal:P32826Proteomes:UP000006548RefSeq:NP_187652.1scanprosite:PS00131scanprosite:PS00560SMR:P32826
STRING:3702.AT3G10410.1SUPFAM:SSF53474SwissPalm:P32826TAIR:AT3G10410tair10-symbols:CPYtair10-symbols:SCPL49TMHMM:TMhelix
UniGene:At.20528UniGene:At.45878UniGene:At.75562UniProt:P32826
Coordinates (TAIR10) chr3:-:3235518..3238063
Molecular Weight (calculated) 57304.50 Da
IEP (calculated) 5.03
GRAVY (calculated) -0.08
Length 516 amino acids
Sequence (TAIR10)
(BLAST)
001: MEKLTFLSLL LHFVVFIAST IPSSSFLLND RTFERSNLPS TRAEKLIREL NLFPQQDLNV IDVADLPLTA AEGPGIVERK FVFPNILADG GPTVDDLGHH
101: AGYYKLPKSR GASMFYFFFE SRNKKDAPVV IWLTGGPGCS SELAVFYENG PFKITSNMSL AWNEYGWDQV SNLLYVDQPV GTGFSYTTDK SDIRHDETGV
201: SNDLYDFLQA FFAEHPKLAK NDFYITGESY AGHYIPAFAS RVHKGNKANE GVHINLKGFA IGNGLTDPAL QYPAYPDYAL EMGLITQKEH DRLEKIVPLC
301: ELSIKLCGTD GTTSCLASYL VCNSLFSGVM SHAGGVNYYD IRKKCVGSLC YDFSNMEKFL NLQSVRKSLG VGDIDFVSCS TSVYQAMLVD WMRNLEVGIP
401: TLLEDGISLL VYAGEYDLIC NWLGNSRWVN AMEWSGKTNF GAAKEVPFIV DGKEAGLLKT YEQLSFLKVR DAGHMVPMDQ PKAALKMLKR WMENSLIEDA
501: TVTVAAQGGE ELVAQM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)