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AT3G10020.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.965
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 47 Blast hits to 47 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J1EUeggNOG:ENOG410YT9REMBL:AC010927EMBL:AY048222EMBL:AY052262EMBL:AY054173EMBL:AY088481
EMBL:AY091708EMBL:CP002686EnsemblPlants:AT3G10020EnsemblPlants:AT3G10020.1entrez:820163ExpressionAtlas:Q9SR67GeneID:820163
GO:GO:0006979GO:GO:0009061Gramene:AT3G10020.1hmmpanther:PTHR12626hmmpanther:PTHR12626:SF7HOGENOM:HOG000243655IntAct:Q9SR67
OMA:IRAVSHDPhylomeDB:Q9SR67Proteomes:UP000006548RefSeq:NP_566365.1STRING:3702.AT3G10020.1TAIR:AT3G10020UniGene:At.23159
UniGene:At.24905UniProt:Q9SR67
Coordinates (TAIR10) chr3:-:3091225..3091674
Molecular Weight (calculated) 16737.60 Da
IEP (calculated) 5.00
GRAVY (calculated) -1.10
Length 149 amino acids
Sequence (TAIR10)
(BLAST)
001: MQAVSVDETK NTVVLRAEHK NEEGRKSVDK FEVKTRNPET IKSVERKLME KGVQRMDRHP SDGIPLRRPP SKSGHGGKYT WEGPDRMEDY EMQPDPPAMD
101: EGDPNYDEEQ VKKSGDDVAV ELVKGEVEVA KEAPAGVARV EVDPRLVGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)