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AT2G44750.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.428
vacuole 0.255
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : thiamin pyrophosphokinase 2
Curator
Summary (TAIR10)
Encodes a thiamine pyrophosphokinase capable of producing thiamine pyrophosphate from free thiamine.
Computational
Description (TAIR10)
thiamin pyrophosphokinase 2 (TPK2); CONTAINS InterPro DOMAIN/s: Thiamin pyrophosphokinase, vitamin B1-binding domain (InterPro:IPR007373), Thiamin pyrophosphokinase, eukaryotic (InterPro:IPR016966), Thiamin pyrophosphokinase (InterPro:IPR006282), Thiamin pyrophosphokinase, catalytic domain (InterPro:IPR007371); BEST Arabidopsis thaliana protein match is: thiamin pyrophosphokinase1 (TAIR:AT1G02880.3); Has 1413 Blast hits to 1411 proteins in 581 species: Archae - 0; Bacteria - 767; Metazoa - 135; Fungi - 134; Plants - 93; Viruses - 0; Other Eukaryotes - 284 (source: NCBI BLink).
Protein Annotations
BRENDA:2.7.6.2EC:2.7.6.2eggNOG:COG1564eggNOG:KOG3153EMBL:AC003672EMBL:AY042898EMBL:AY081493
EMBL:CP002685EnsemblPlants:AT2G44750EnsemblPlants:AT2G44750.1EnsemblPlants:AT2G44750.2entrez:819084ExpressionAtlas:F4IV16Gene3D:2.60.120.320
Gene3D:3.40.50.10240GeneID:819084Genevisible:F4IV16GO:GO:0004788GO:GO:0005524GO:GO:0005829GO:GO:0006772
GO:GO:0009229GO:GO:0016301GO:GO:0030975gramene_pathway:2.7.6.2gramene_pathway:THISYNARA-PWYhmmpanther:PTHR13622hmmpanther:PTHR13622:SF6
HOGENOM:HOG000180834InterPro:IPR006282InterPro:IPR007371InterPro:IPR007373InterPro:IPR016966KEGG:00730+2.7.6.2KEGG:ath:AT2G44750
KO:K00949OMA:GMEGSWCPaxDb:F4IV16Pfam:PF04263Pfam:PF04265PhylomeDB:F4IV16PIR:T01602
PIRSF:PIRSF031057PRIDE:F4IV16PRO:PR:F4IV16ProteinModelPortal:F4IV16Proteomes:UP000006548Reactome:R-ATH-196819RefSeq:NP_566026.1
RefSeq:NP_850424.1SMART:SM00983SMR:F4IV16STRING:3702.AT2G44750.2SUPFAM:SSF63862SUPFAM:SSF63999TAIR:AT2G44750
tair10-symbols:TPK2TIGRfam:TIGR01378TIGRFAMs:TIGR01378UniGene:At.48590UniGene:At.70253UniPathway:UPA00060UniProt:O80514
Coordinates (TAIR10) chr2:+:18451510..18452754
Molecular Weight (calculated) 29974.80 Da
IEP (calculated) 6.07
GRAVY (calculated) -0.25
Length 265 amino acids
Sequence (TAIR10)
(BLAST)
001: MLSAMDVMIH SSSFLLPCDE TCGTRYALVV LNQNLPRFTP LLWEHAKLRL CADGGANRIY DELPLFFPHE DPFVIRNRYK PDVIKGDMDS IRRDVLDFYV
101: YWGTKVIDES HDQDTTDLDK CISYIRHSTL NQESSRILAT GALGGRFDHE AGNLNVLYRY PDTRIVLLSD DCLIQLLPKT HRHEIHIHSS LQGPHCGLIP
201: IGTPSANTTT SGLKWDLSNT EMRFGGLIST SNLVKEEIIT VESDSDLLWT ISIKKTGLPV QDHKP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)