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AT1G71235.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 0.997
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:CP002684EnsemblPlants:AT1G71235EnsemblPlants:AT1G71235.1entrez:843464GeneID:843464Gramene:AT1G71235.1KEGG:ath:AT1G71235
PaxDb:F4I8G4PRIDE:F4I8G4Proteomes:UP000006548RefSeq:NP_683489.1TAIR:AT1G71235UniGene:At.52474UniProt:F4I8G4
Coordinates (TAIR10) chr1:+:26854559..26855222
Molecular Weight (calculated) 16855.10 Da
IEP (calculated) 5.64
GRAVY (calculated) -0.41
Length 148 amino acids
Sequence (TAIR10)
(BLAST)
001: MAIIFLCLCL LMKSVPYGTV DDDAHKELCT ANLTIFNKLI KNALHTTWQT YTLEDVVLRR ILESLSYPEL RGSPGIPNLQ ENMKSDSVAF FTMEYRKPLL
101: LGVEDLSLFD DDVDDDSHSN KRKTPPCSES KRTDKRSSYG HVSEYSSK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)