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AT1G69890.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.651
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF569)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF569 (InterPro:IPR007679), Actin cross-linking (InterPro:IPR008999); BEST Arabidopsis thaliana protein match is: Actin cross-linking protein (TAIR:AT1G27100.1); Has 237 Blast hits to 216 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 237; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JV21eggNOG:ENOG41106B4EMBL:AC010675EMBL:AF375417EMBL:AY087391EMBL:BT000859EMBL:CP002684
EnsemblPlants:AT1G69890EnsemblPlants:AT1G69890.1entrez:843325GeneID:843325Gramene:AT1G69890.1hmmpanther:PTHR31205hmmpanther:PTHR31205:SF2
InterPro:IPR007679InterPro:IPR008999KEGG:ath:AT1G69890OMA:PKSEGRIPfam:PF04601PhylomeDB:Q9CAS2PIR:C96721
Proteomes:UP000006548RefSeq:NP_564980.1SMR:Q9CAS2STRING:3702.AT1G69890.1SUPFAM:SSF50405TAIR:AT1G69890UniGene:At.43696
UniProt:Q9CAS2
Coordinates (TAIR10) chr1:-:26323426..26324527
Molecular Weight (calculated) 31217.70 Da
IEP (calculated) 6.52
GRAVY (calculated) -0.58
Length 279 amino acids
Sequence (TAIR10)
(BLAST)
001: MDFFNQAKAV RMRNVHDKYL TADEDEETVT QDRNGSDKRA RWIVEPVRGS FEVIRLRSCY GNYLTASNER FLLGATGRKV VLSKPARLDS SVEWEPVREG
101: SKMKLKTRYG NLLRANGGLP PWRNSVTHDT SHVLDSFLWD VDVVEILVGT TTPAPAPAPV TTPPPHRRPS YTYSPVSRTS SEKSEEELTV PPPKSEGRPI
201: YYHIADEEGH VEEESAVGYA LTFKGNSVEQ LTQALQEETS MDDVVVCTRH PSNGKLFPLR LQLPPNSGTM HVILVPSST
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)