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AT1G14880.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data no PPI data
Description (TAIR10) protein_coding : PLANT CADMIUM RESISTANCE 1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
PLANT CADMIUM RESISTANCE 1 (PCR1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLANT CADMIUM RESISTANCE 2 (TAIR:AT1G14870.1); Has 778 Blast hits to 777 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 123; Fungi - 110; Plants - 511; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZQReggNOG:ENOG410XUTPEMBL:AC006917EMBL:AK118861EMBL:BT005663EMBL:CP002684EnsemblPlants:AT1G14880
EnsemblPlants:AT1G14880.1entrez:838053GeneID:838053Genevisible:Q9LQU2GO:GO:0005773GO:GO:0005886GO:GO:0016021
Gramene:AT1G14880.1hmmpanther:PTHR15907hmmpanther:PTHR15907:SF43HOGENOM:HOG000237749InterPro:IPR006461KEGG:ath:AT1G14880OMA:INIPVGH
PaxDb:Q9LQU2Pfam:PF04749Pfam:Q9LQU2PhylomeDB:Q9LQU2PRIDE:Q9LQU2PRO:PR:Q9LQU2Proteomes:UP000006548
RefSeq:NP_172941.1STRING:3702.AT1G14880.1TAIR:AT1G14880tair10-symbols:PCR1TCDB:1.A.87.3.7TIGRfam:TIGR01571TIGRFAMs:TIGR01571
UniGene:At.70197UniProt:Q9LQU2
Coordinates (TAIR10) chr1:-:5132791..5133663
Molecular Weight (calculated) 16503.90 Da
IEP (calculated) 7.66
GRAVY (calculated) -0.11
Length 151 amino acids
Sequence (TAIR10)
(BLAST)
001: MEAQLHAKPH AQGEWSTGFC DCFSDCRNCC ITLCCPCITF GQVAEIVDRG SKSCCAAGAL YMLIDLITSC GRMYACFYSG KMRAQYNIKG DGCTDCLKHF
101: CCNLCALTQQ YRELKHRGFD MSLGWAGNAE KQQNQGGVAM GAPAFQGGMT R
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)