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AT1G11690.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.990
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20350.1); Has 5959 Blast hits to 4807 proteins in 476 species: Archae - 156; Bacteria - 436; Metazoa - 2789; Fungi - 309; Plants - 336; Viruses - 9; Other Eukaryotes - 1924 (source: NCBI BLink).
Protein Annotations
DNASU:837713eggNOG:ENOG410JTKIeggNOG:ENOG41107RNEMBL:AB493450EMBL:AC007296EMBL:CP002684EnsemblPlants:AT1G11690
EnsemblPlants:AT1G11690.1entrez:837713GeneID:837713Gramene:AT1G11690.1hmmpanther:PTHR31071hmmpanther:PTHR31071:SF14HOGENOM:HOG000153447
KEGG:ath:AT1G11690ncoils:CoilOMA:MWREERVPhylomeDB:Q9SAA8PIR:E86250Proteomes:UP000006548RefSeq:NP_172634.1
TAIR:AT1G11690UniGene:At.51576UniProt:Q9SAA8
Coordinates (TAIR10) chr1:+:3941469..3942212
Molecular Weight (calculated) 29772.50 Da
IEP (calculated) 4.71
GRAVY (calculated) -0.91
Length 247 amino acids
Sequence (TAIR10)
(BLAST)
001: MESITEWDLG SLRTYYSVEP SENFQEDEFL DFNLVPCLQT ELWKAQTRIK ELEAEKFKSE ETIRCLIRNQ RNEKEETTNP FVDYLKEKLS KEREEKKRVK
101: AENSRLKKKI LDMESSVNRL RRERDTMEKV CEELVTRIDE LKVNTRRVWD ETEEERQMLQ MAEMWREERV RVKFMDAKLA LQEKYEEMNL FVVELEKCLE
201: TAREVGGIEE KRLRHGEGLI KMAKSMEVVD SKIDFERFEF VSDEGNV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)