AT5G59120.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : subtilase 4.13 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
subtilase 4.13 (SBT4.13); FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Peptidase S8, subtilisin-related (InterPro:IPR015500), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: subtilase 4.12 (TAIR:AT5G59090.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:23864897..23868020 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 76873.30 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.84 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.01 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 732 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MATLAASSSL LSCLLVLFLS SVSAVTDDKQ VYIVYMGSLS SRADYTPTSD HMNILQEVTG ESSIEGRLVR SYKRSFNGFA ARLTESERER VAKMVGVVSV 101: FPNKKLQLQT TTSWDFMGLK EGIKTKRNPT VESDTIIGVI DSGITPESQS FSDKGFGPPP QKWKGVCSGG KNFTCNNKLI GARDYTSEGT RDMDGHGTHT 201: ASTAAGNAVV DASFFGIGNG TVRGGVPASR VAAYKVCTPT GCSSEALLSA FDDAIADGVD LITISIGDKT ASMFQNDPIA IGAFHAMAKG VLTVNSAGNS 301: GPKPISVSGV APWILTVAAS TTNRGFVTKV VLGNGKTLVG KSVNAYEMKG KDYPLVYGKS AASSACDAES AGLCELSCVD KSRVKGKILV CGGPGGLKIV 401: ESVGAVGLIY RTPKPDVAFI HPLPAAGLLT EDFESLVSYL ESTDSPQAIV LKTEAIFNRT SPVIASFSSR GPNTIAVDIL KPDITAPGVE ILAAYSPAGE 501: PSQDDTRHVK YSVLSGTSMS CPHVAGVAAY VKTFNPKWSP SMIQSAIMTT AWPVNATGTG IASTEFAYGS GHVDPIAASN PGLVYELDKS DHIAFLCGMN 601: YTSQVLKVIS GETVTCSEAK KILPRNLNYP SMSAKLSGSG TTFTVTFNRT LTNVGTPNST YTSKVVAGHG SKLDVKITPS VLSFKTVNEK QSFTVTVTGS 701: NLDSEVPSSA NLIWSDGTHN VRSPIVVYTS DY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)