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AT5G54165.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.786
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JSAUeggNOG:ENOG41114J9EMBL:AK220672EMBL:CP002688
EMBL:DQ487712EnsemblPlants:AT5G54165EnsemblPlants:AT5G54165.1entrez:6241133
GeneID:6241133Gramene:AT5G54165.1hmmpanther:PTHR33641hmmpanther:PTHR33641:SF4
KEGG:ath:AT5G54165OMA:PMRIAPEPhylomeDB:Q570N6Proteomes:UP000006548
RefSeq:NP_001119434.1TAIR:AT5G54165UniGene:At.70558UniGene:At.9259
UniProt:Q570N6
Coordinates (TAIR10) chr5:+:21984620..21984868
Molecular Weight (calculated) 9087.78 Da
IEP (calculated) 7.36
GRAVY (calculated) -0.67
Length 82 amino acids
Sequence (TAIR10)
(BLAST)
1: MMSIFSPFEA LYAESNGFKM IFSGTKKQSS GDNQSPATDQ QKNAGKTPIS SDDEKSNKKK IQPMRIAPEL DGLHCFETIL PF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)