AT5G26310.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.895 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : UDP-Glycosyltransferase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
UGT72E3 is an UDPG:coniferyl alcohol glucosyltransferase which glucosylates sinapyl- and coniferyl alcohol as well as sinapic acid. The enzyme is thought to be involved in lignin- and phenylpropanoid metabolism. A knockdown mutant line (72E3KD) was obtained using RNAi silencing. No reduction in coniferyl alcohol 4-<i>O</i>-glucoside and sinapyl alcohol 4-<i>O</i>-glucoside was detected in this line compared to wildtype, in contrast with the knockdown line constructed for UGT72E2 displayed a twofold reduction in the these phenylpropanoid 4-<i>O</i>-glucosides. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
UGT72E3; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups, coniferyl-alcohol glucosyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth, 4 anthesis; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G66690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr5:+:9234739..9236184 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 52906.80 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.72 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.05 | ||||||||||||||||||||||||||||||||||||||||
| Length | 481 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MHITKPHAAM FSSPGMGHVL PVIELAKRLS ANHGFHVTVF VLETDAASVQ SKLLNSTGVD IVNLPSPDIS GLVDPNAHVV TKIGVIMREA VPTLRSKIVA 101: MHQNPTALII DLFGTDALCL AAELNMLTYV FIASNARYLG VSIYYPTLDE VIKEEHTVQR KPLTIPGCEP VRFEDIMDAY LVPDEPVYHD LVRHCLAYPK 201: ADGILVNTWE EMEPKSLKSL QDPKLLGRVA RVPVYPVGPL CRPIQSSTTD HPVFDWLNKQ PNESVLYISF GSGGSLTAQQ LTELAWGLEE SQQRFIWVVR 301: PPVDGSSCSD YFSAKGGVTK DNTPEYLPEG FVTRTCDRGF MIPSWAPQAE ILAHQAVGGF LTHCGWSSTL ESVLCGVPMI AWPLFAEQNM NAALLSDELG 401: ISVRVDDPKE AISRSKIEAM VRKVMAEDEG EEMRRKVKKL RDTAEMSLSI HGGGSAHESL CRVTKECQRF LECVGDLGRG A |
||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)