AT5G24200.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.982 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G24210.1); Has 219 Blast hits to 218 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 214; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:8203348..8205626 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 39086.90 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 7.29 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||
| Length | 344 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASRREIFSF SGPPPIPSFD WNNLYHRASL VSCLVQGVYT MERDRQQNRC GSDSKARPWW AFYRFTLYQQ LRDALDGSIY GAVFQNDINY QNTPNSIVPP 101: RYIIALRGTI LSPQTMACDV QLNIRIAFEN LYRGGRFVQA IQAMQYFVAT YGNTAIWIAG HSLGAGLALL AGKIMAMYGC PVEAYIFNPP ISLIPLEQLV 201: ESEDLKCAVR LARDILKAGI ARVLDLNEGH ESHLFMNLAS WRPHLFVNQS DPICSEYIGY FNHRGDMNEL QLGRIERLAR YSIRRILFGG GESSSSYSSE 301: EHLHFLPSAI VMVNTIISPD FQTDHGIHQW WNPMLGQFSY QIIA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)