AT5G18860.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : inosine-uridine preferring nucleoside hydrolase family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
inosine-uridine preferring nucleoside hydrolase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: Inosine-uridine preferring nucleoside hydrolase family protein (TAIR:AT5G18890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:6291023..6295581 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 99077.50 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.79 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.27 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 890 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLTSPTLKSL WFLFTILGLL GQNLPCVLSS SHRILVDTDV DTDDLFAILY LLKLNKSEFD LVGITLSANA WTNAGHAVNQ VYDLLHMMDR DDIPVGVGGE 101: GGISDDGTIH SDVGGYFPII EQGMTTTGEC RYRQAIPKGL GGLLDIDSNY GFRKQFLPQG NRRYTPLQQP TAQKVIVDKI SEGPTTVILL GSHTNFALFL 201: MSNPHLKHNI QHIYIMGGGV RSQNPTGCCP ANSTVAECQP RQCGNRGNLF TDYTSNPYSE FNIFADPFAA YQVFHSGVPV TLVPLDATNT IPINQKFFET 301: FENNYQRTYE AQYVFLSLKI ARDTWFDDEF YKSYFMWDSF TAGVAVSIMR NSANKNNKNG ENDFAEMEYM NITVVTSNKP YGRSDGSNPF FDNRRTPKFN 401: LALGGVHSGH VQTGLRDPTC LPKSGIGRGK CKDGYTQEIS GSDSVRVLVA TRAKPNINIK SKLDREFYVD FLEVLNRPEE TGRFNFSSQF PYYKEELFRP 501: DLSKTRPGKP VVFDMDMSAG DFLSLFYLLK VPVDKIDLKA IIVSPTGWAN AATIDVVYDL LHMMGRDDIP VGLGDMLALN QSDPIFPPVG GCKYVKAIPR 601: GCGGFLDSDT LYGLARDLPR SPRRYTAENS VTHGAPRDTD RPELRQPLAI EVWQNLTKSG NGVSKITVLT NGPLTNLAKI ISSDKKSSSL IKEVYIVGGH 701: INREKSDKGN IFTIPSNAYA EFNMFLDPLA AKTVLESALN ITLVPLATQH KLSSFQTMLD RLYSSTKTPE ARFVKRLLVR LQALHQKHRR YTHIDMFLGE 801: VLGAVLLGGD DASLKPKMRA EHIKVIAEGD ESRDGKILID KLRGKQIKIL ERVDLISISE SFASRLDDKK QSAVIGSFEE QKKIWSTPPS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)