AT4G40020.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.996 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Myosin heavy chain-related protein | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Myosin heavy chain-related protein; BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT5G16730.1); Has 160438 Blast hits to 85353 proteins in 3205 species: Archae - 2021; Bacteria - 26641; Metazoa - 65466; Fungi - 13044; Plants - 8368; Viruses - 589; Other Eukaryotes - 44309 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:18553453..18555300 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 70027.70 Da | ||||||||||||||||||||||||
| IEP (calculated) | 4.92 | ||||||||||||||||||||||||
| GRAVY (calculated) | -1.08 | ||||||||||||||||||||||||
| Length | 615 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGEVDEKPSI DVASPRYSSN KVADIGTELY KMKASLENRE NEVVSLKQEL LKKDIFIKNL EAAEKKLLDS FKDQSRELEE TKALVEESKV EIASLKEKID 101: TSYNSQDSSE EDEDDSSVQD FDIESLKTEM ESTKESLAQA HEAAQASSLK VSELLEEMKS VKNELKSATD AEMTNEKAMD DLALALKEVA TDCSQTKEKL 201: VIVETELEAA RIESQQWKDK YEEVRKDAEL LKNTSERLRI EAEESLLAWN GKESVFVTCI KRGEDEKNSL LDENNRLLEA LVAAENLSKK AKEENHKVRD 301: ILKQAINEAN VAKEAAGIAR AENSNLKDAL LDKEEELQFA LKEIERVKVN EAVANDNIKK LKKMLSEIEV AMEEEKQRSL NRQESMPKEV VEVVEKKIEE 401: KEKKEEKKEN KKEKKESKKE KKEHSEKKED KEKKEQTHQN FDKRMIGKTC SFSIMKLAHH NHNHKHNKET SEEETKNANG GNHQENSDES GEGNSPSSDS 501: YLFKGSIFDI AETPHAQMHH KRRSSCTFLE EVETINPEDL ENLDGNHLEE GELNDKGAVA RKKKAFIRRF GDLLVRRKSL SFSHKKESST DSQDKQQPQT 601: PTSPSPPLPP MSPEP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)