AT4G31780.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : monogalactosyl diacylglycerol synthase 1 | ||||||||||||||||
| Curator Summary (TAIR10) |
Encodes an A-type monogalactosyldiacylglycerol (MGDG) synthase. It represents the isoform responsible for the bulk of MGDG synthesis in Arabidopsis. | ||||||||||||||||
| Computational Description (TAIR10) |
monogalactosyl diacylglycerol synthase 1 (MGD1); FUNCTIONS IN: UDP-glycosyltransferase activity, 1,2-diacylglycerol 3-beta-galactosyltransferase activity, transferase activity, transferring glycosyl groups, UDP-galactosyltransferase activity; INVOLVED IN: thylakoid membrane organization, glycolipid biosynthetic process, galactolipid biosynthetic process, embryo development; LOCATED IN: chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Monogalactosyldiacylglycerol synthase (InterPro:IPR009695), Glycosyl transferase, family 28, C-terminal (InterPro:IPR007235); BEST Arabidopsis thaliana protein match is: monogalactosyldiacylglycerol synthase type C (TAIR:AT2G11810.1); Has 1828 Blast hits to 1828 proteins in 656 species: Archae - 0; Bacteria - 1628; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:15374222..15376873 | ||||||||||||||||
| Molecular Weight (calculated) | 55440.00 Da | ||||||||||||||||
| IEP (calculated) | 8.99 | ||||||||||||||||
| GRAVY (calculated) | -0.15 | ||||||||||||||||
| Length | 504 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MQNPSTVTQE SAAPVFDFFP RLRGLTSRNR SPCSNSDGYA LSSSNALYFN GFRTLPSRRM GKTLASLSFN TKSSAGSSLR RFISDFNSFI RFHCDKVVPE 101: SFASVGGVGL SSDENGIREN GTGGVLGEEG LPLNGVEADR PKKVLILMSD TGGGHRASAE AIRAAFNQEF GDEYQVFITD LWTDHTPWPF NQLPRSYNFL 201: VKHGTLWKMT YYGTSPRIVH QSNFAATSTF IAREIAQGLM KYQPDIIISV HPLMQHVPLR VLRSKGLLKK IVFTTVITDL STCHPTWFHK LVTRCYCPST 301: EVAKRAQKAG LETSQIKVYG LPVRPSFVKP VRPKVELRRE LGMDENLPAV LLMGGGEGMG PIEATARALA DALYDKNLGE AVGQVLIICG RNKKLQSKLS 401: SLDWKIPVQV KGFITKMEEC MGACDCIITK AGPGTIAEAM IRGLPIILNG YIAGQVSREC TVRGGKRMWE ILKITERDIE DCSGLVWTGI ERVGDNVTEC 501: IEAG |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)