AT4G26420.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.995 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
A member of the Arabidopsis SABATH methyltransferase gene family. Encodes GAMT1, a methyltransferase that uses S-adenosine-L-methionine (SAM) as a methyl donor to methylate the carboxyl group of GAs, resulting in the methyl esters of GAs (MeGAs). Expressed most highly in the siliques during seed development. | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
GAMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: gibberellic acid methyltransferase 2 (TAIR:AT5G56300.1); Has 916 Blast hits to 905 proteins in 122 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 3; Plants - 723; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:13350895..13352487 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 41566.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.94 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.24 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 376 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MESSRSLEHV LSMQGGEDDA SYVKNCYGPA ARLALSKPML TTAINSIKLT EGCSSHLKIA DLGCAIGDNT FSTVETVVEV LGKKLAVIDG GTEPEMEFEV 101: FFSDLSSNDF NALFRSLDEK VNGSSRKYFA AGVPGSFYKR LFPKGELHVV VTMSALQWLS QVPEKVMEKG SKSWNKGGVW IEGAEKEVVE AYAEQADKDL 201: VEFLKCRKEE IVVGGVLFML MGGRPSGSVN QIGDPDSSLK HPFTTLMDQA WQDLVDEGLI EEEKRDGFNI PVYFRTTEEI AAAIDRCGGF KIEKTENLII 301: ADHMNGKQEE LMKDPDSYGR DRANYAQAGL KPIVQAYLGP DLTHKLFKRY AVRAAADKEI LNNCFYHMIA VSAVRV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)