suba logo
AT4G04745.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
mitochondrion 0.929
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21902.1); Has 32 Blast hits to 32 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JS0JeggNOG:ENOG4111DSYEMBL:BT012515EMBL:BT015155
EMBL:CP002687EnsemblPlants:AT4G04745EnsemblPlants:AT4G04745.1entrez:825810
GeneID:825810Gramene:AT4G04745.1hmmpanther:PTHR35687hmmpanther:PTHR35687:SF1
HOGENOM:HOG000064696KEGG:ath:AT4G04745OMA:MEKEDPQPhylomeDB:Q6NL28
Proteomes:UP000006548RefSeq:NP_680597.2TAIR:AT4G04745UniGene:At.49676
UniProt:Q6NL28
Coordinates (TAIR10) chr4:-:2412863..2413303
Molecular Weight (calculated) 17222.50 Da
IEP (calculated) 11.62
GRAVY (calculated) -0.45
Length 146 amino acids
Sequence (TAIR10)
(BLAST)
001: MLLAYSIFLH TTIYRIRTQK KKIESMALMV KNSPYEYTKM EKEDPQELIH RRAQFLIQKV LERADSKTRQ HQQRRRSSGP LIMIRVVGIR MRIGKKLRKL
101: RKTNTCICNN LITRFLKSFK RFLCSSSSSS SSRTISDLPP LFSLQV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)