AT3G61380.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.996 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 970 Blast hits to 833 proteins in 189 species: Archae - 0; Bacteria - 72; Metazoa - 269; Fungi - 106; Plants - 168; Viruses - 2; Other Eukaryotes - 353 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:22708769..22711279 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 80735.40 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.32 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.59 | ||||||||||||||||||||||||||||
| Length | 718 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MERNCRRNLE REGINGIGCV WVFISLFGSN QKRLLMDNKR GSKRVSGNEM KQITCSCESS HESVDEEDIH VSVAGDEHVE TEVCKSLVDE SEEKFKEIIK 101: RLIAQKEGEI QTCKDLLEAF HVLGSEEEES FLKKKLSNED AQTLGDSKRV EEEKPEVVSK QEAVVIPKRK ANFFSRKWKS EERRNRSQVA KTIVVLKPGP 201: NTLDVDSSTG LHSTANKSKT GRTFSRFLIG LVKRRLQSAV GKKSCDVSVD KRSQNCSTQE EIQSKSEEKH DVSDKEEPFC DERTTEDGKE ETIYSSEDSK 301: KIMSGLYIAA KKHLSEMLAN GDIDVNLPDK EVPRILGKIL SLPEFCSPAD SPRLIPAHDL VSTLSQTTEQ PEILQTPETS SATNDLIDED SDKDDDTLFT 401: IDVSVPRDYG NETENIDNDE ESEIDPLSET CSSSVSREVE NVDEDVEKEM LNHQAHSPAS PLESPTTCSV RLTECKETAT DAQGKLSPVS VLETLFTDDD 501: SSPTTSTSFS SAGMRMQPLC IRFDEVDSPK PEKDNNVEAT IDDKELTLAY IEAVVKSAAL SWEELLTRPF YSEQLLELEL TDGIVFSSTQ LCDDKNLLYD 601: CINEVLMDFC WNEFNPGPWI SFVKPEVQLI SDMEIAAKVA QEGVYWHLQP LPFPHTLDQI VKKDMARTGS WMDLRFEIGC LGSYTSEMIL DELVEEIIMS 701: CRDMVQVEPM QEPSSDNL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)