AT3G44860.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.993 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : farnesoic acid carboxyl-O-methyltransferase | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a farnesoic acid carboxyl-O-methyltransferase. | ||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
farnesoic acid carboxyl-O-methyltransferase (FAMT); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity, farnesoic acid O-methyltransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G44870.1); Has 885 Blast hits to 875 proteins in 112 species: Archae - 0; Bacteria - 44; Metazoa - 9; Fungi - 5; Plants - 718; Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:16379689..16380939 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 38517.10 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.75 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||
| Length | 348 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSTSFTMIGG EGPNSYREHS KYQGALVIAA KEKINEAIST KLDIDFTSNL VNIADFGCSS GPNTFTAVQT LIDAVENKYK KESNIEGIEF QVFFNDSSNN 101: DFNTLFKTLP PARLYFASGV PGSFFGRVLP KNSLHVGVSS YSLHFVSKVP KEIKDRDSLV WNKDIHCSGS SKEVVKLYLG QYKIDVGSFL TARAQELVSG 201: GLLLLLGSCR PTGVQMFETV EGMMIDFIGS SLNEIANQGL IDQQKLDTFK LPIYAPNVDE LKQIIEDNKC FTIEAFEKIS HAKGEYPLDP EYLTSAFKVT 301: VGGSVASLFG QDGMEKTYEL VKEKTQEMLP QIAKAKPGMQ YLIVLRRN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)