AT3G24360.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ATP-dependent caseinolytic (Clp) protease/crotonase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ATP-dependent caseinolytic (Clp) protease/crotonase family protein; FUNCTIONS IN: 3-hydroxyisobutyryl-CoA hydrolase activity, catalytic activity; INVOLVED IN: fatty acid beta-oxidation, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR:AT4G13360.1); Has 20885 Blast hits to 20875 proteins in 1799 species: Archae - 367; Bacteria - 14429; Metazoa - 898; Fungi - 583; Plants - 486; Viruses - 0; Other Eukaryotes - 4122 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:8839832..8842799 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 45742.90 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.41 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 418 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MIKSLSLASA RIFFSRTSPS FLIPFSKLSV SHRRKFSVMA SGSDEFVKGN VYPNGVALIT LDRPKALNAM NLEMDLKYKS LLDEWEYDPG VKCVVVEGST 101: SRAFCAGMDI KGVVAEILMD KNTSLVQKVF TAEYSLICKI AGYRKPYISL MDGITMGFGL GLSGHGRYRV ITERTVLAMP ENGIGLFPDV GFSYIAAHSP 201: GEGSVGAYLG MTGRRISTPS DALFVGLGTH YVPSGKLGSL REAILSADLS KDPQQHIQAT LSNYSSDPET ESHLQMLLPQ IESAFSVSKS VKETIEELKK 301: FQQSSEASVA EWANEAVQGI EKGAPFSLYL THKYFSKVAC AKGKTNNAMA TLNGVMITEY RIALRSALRS DFTEGVRAVL TDKDQNPKWK PASLDEVDET 401: EVDALFMPLS PEFEELNV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)