AT3G22420.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.973 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : with no lysine (K) kinase 2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
with no lysine (K) kinase 2 (WNK2); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 1 (TAIR:AT3G04910.1); Has 103279 Blast hits to 102406 proteins in 3863 species: Archae - 91; Bacteria - 9763; Metazoa - 38283; Fungi - 9889; Plants - 28050; Viruses - 396; Other Eukaryotes - 16807 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:7946652..7948958 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 65330.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.95 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.49 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 568 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNGEESFVED CSVFVEIDPS GRYGRYDEIL GKGASKTVYR AFDEYEGIEV AWNQVKLRNF TRNPEELEKF FREIHLLKTL NHQNIMKFYT SWVDTNNLSI 101: NFVTELFTSG TLRQYRLRHR RVNIRAVKQW CKQILKGLLY LHSRSPPIIH RDLKCDNIFI NGNQGEVKIG DLGLAAILRK SHAVRCVGTP EFMAPEVYDE 201: EYNELVDVYA FGMCVLEMVT FDYPYSECTH PAQIYKKVTS GKKPEAFYLV KDPEVREFVE KCLANVTCRL TALELLQDPF LQDDNMDGFV MRPIDYYNGY 301: DETGVFLRHP LIDDPLYHDQ FESSQICEID LFANDDEDHV DISIKGKRNG DDGIFLRLRI SDAEGRIRNI YFPFETAIDT AWSVAVEMVS ELDITNQDVA 401: KIAEMIDAEI AALVPDWKND TESSQNVNNN KNNNTAGFCG ECASNGYIQE TVSSGEKSHH NHHEFDSSED KSCSSVHGRF ADMWGLRESY SDDGEKQSSR 501: KVRSGRWSEN EMRRELRWLK ARHKIQLMKM RGQTICETPI EISLTPGTSV SLPLLYRAIS LPVDAVDM |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)