AT3G21070.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NAD kinase 1 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a protein with NAD(H) kinase activity. | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
NAD kinase 1 (NADK1); FUNCTIONS IN: NAD+ kinase activity, NADH kinase activity; INVOLVED IN: NADP biosynthetic process, response to virus, response to hydrogen peroxide, pyridine nucleotide biosynthetic process, response to ionizing radiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: ATP-NAD kinase, PpnK-type (InterPro:IPR016064), ATP-NAD/AcoX kinase (InterPro:IPR002504), ATP-NAD kinase, PpnK-type, all-beta (InterPro:IPR017437); BEST Arabidopsis thaliana protein match is: NAD kinase 2 (TAIR:AT1G21640.1); Has 7879 Blast hits to 7861 proteins in 2677 species: Archae - 264; Bacteria - 5251; Metazoa - 207; Fungi - 397; Plants - 118; Viruses - 0; Other Eukaryotes - 1642 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:7380434..7383874 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 58941.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.37 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 530 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSSTYKLNHT DSFANGDAKS LLPNPENGFT HLTSLAQSEK AVQELLLQQT PMQATDDHLV EFSEALRTVA KALRGAAEGK ALAQAEAAEW KRRYELERSK 101: NVELQHKELS NGVCADESNG QRMEHLAKSP RLYAQEISSN GMETICSHEV LQDGGFNSFN NKLKRKASFK LSWGCKGMAN DQHKKEIVSF ERGNISTAER 201: SSKQISLTWE SDPQTVLIIT KPNSTSVRVL SVDMVRWLRT QKGLNIYVEP RVKEELLSES SSFNFVQTWE DVMIYDADKE ISLLHTKVDL LITLGGDGTV 301: LWAASMFKGP VPPIVPFSMG SLGFMTPFHS EQYRDCLEAI LKGPISITLR HRLQCHIIRD KATHEYEPEE TMLVLNEVTI DRGISSYLTN LECYCDNSFV 401: TCVQGDGLIL STTSGSTAYS LAAGGSMVHP QVPGILFTPI CPHSLSFRPL ILPEHVTVRV QVPFNSRSSA WVSFDGKDRK QLEAGDALVC SMAPWPVSTA 501: CQVESTNDFL RSIHDGLHWN LRKTQSADGP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)