AT3G09450.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.642 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
CONTAINS InterPro DOMAIN/s: Fusaric acid resistance protein, conserved region (InterPro:IPR006726); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G28780.1); Has 503 Blast hits to 494 proteins in 215 species: Archae - 0; Bacteria - 423; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:2907548..2910091 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 85688.70 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 8.41 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.22 | ||||||||||||||||||||||||||||
| Length | 775 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRDTTWLERL GLALRTAMAC LIVSLTTLYG PKPLRHFTTF PAFSYLTTIL IWLSDAEPTY GEVLKCCLDV SYATFQTIAI ALVSVLVVGP ASLGNGLVAP 101: VAVALASFIV AFPVSTSLLT KRIAFGQIVV VYVTFVVFNG EVAHVFMLPV HVAGSTALGA IASLIAVLLP FPRLAHSQMS KGCKLYAENA LERLNMFVEI 201: MMARDNTTAQ VLIARAASLS AAAKNTLKNI KIHHERISWE RPDTRFLSRK QKLDPAEKLH ATDFLLRGLE LALGSCSSFP QGMSRDELTR LLEGPRTHIA 301: PRSESTLKSQ DSLGWHHEAE SLSTAALPVC FFRYCVELFR GDFLSLRQDS KSVNGRTTEE EIHPANEGLS MARKFWDILC VWMARERFVF AFKCSISLGL 401: AVLFGILYNK NNGYWSGLTV AISLVSGRQA TLTVANSRLQ GTAMGSVYGL ICCSVFQRLE EFRFLPLLPW IILAVFMRHS KVYGQPGGVT AAIAALLILG 501: RRNYGAPTEF AIARIVEASI GLLCFVFGEI LVTPARAATL ARTEISHCLD ALLDCIQSLV LCSEQKNQKV VADLRKSQVK LKSHVEALER FAAEALTEPK 601: IPFLRRLNTD SYNRLLGSFS KISDLCLYVC DGLKNLSGVQ PTLAFPWDNI THELRAFQEK LHPSVKCLKE ISQTKSQARL QKELQKRKIC HDVEAGTTSN 701: DNYSYMELGP SQADVERFSV SFVMLLKEAT DKISCNTADD AFKSETALCL SSLGFCISRL MQETICIMTE ITHTT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)