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AT3G04530.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.676
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phosphoenolpyruvate carboxylase kinase 2
Curator
Summary (TAIR10)		 Encodes a second Arabidopsis phosphoenolpyruvate carboxylase kinase gene product with a different expression pattern from PPCK1. Expression of the gene is upregulated by exposure of the plant to light.
Computational
Description (TAIR10)		 phosphoenolpyruvate carboxylase kinase 2 (PPCK2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 1 (TAIR:AT1G08650.1); Has 120539 Blast hits to 118552 proteins in 3545 species: Archae - 165; Bacteria - 14785; Metazoa - 43114; Fungi - 13204; Plants - 27915; Viruses - 518; Other Eukaryotes - 20838 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G04530-MONOMERBioGrid:4944BRENDA:4.1.1.49EC:2.7.11.1
eggNOG:ENOG410XRMJeggNOG:KOG0032EMBL:AC022287EMBL:AF358915
EMBL:AY040830EMBL:CP002686EnsemblPlants:AT3G04530EnsemblPlants:AT3G04530.1
entrez:819609GeneID:819609Genevisible:Q93VK0GO:GO:0004674
GO:GO:0004683GO:GO:0005516GO:GO:0005524GO:GO:0005737
GO:GO:0005886GO:GO:0006468GO:GO:0009416GO:GO:0009738
GO:GO:0009931GO:GO:0016036GO:GO:0018105GO:GO:0035556
GO:GO:0046777GO:GO:0046898Gramene:AT3G04530.1hmmpanther:PTHR24349
hmmpanther:PTHR24349:SF76HOGENOM:HOG000233016InParanoid:Q93VK0InterPro:IPR000719
InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441KEGG:ath:AT3G04530
OMA:EPRIMAMPaxDb:Q93VK0Pfam:PF00069Pfam:Q93VK0
Pfscan:PS50011PRIDE:Q93VK0PRO:PR:Q93VK0PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:Q93VK0Proteomes:UP000006548
Reactome:R-ATH-2142691Reactome:R-ATH-3371453Reactome:R-ATH-450385Reactome:R-ATH-5687128
RefSeq:NP_566229.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMR:Q93VK0STRING:3702.AT3G04530.1SUPFAM:SSF56112TAIR:AT3G04530
tair10-symbols:ATPPCK2tair10-symbols:PEPCK2tair10-symbols:PPCK2UniGene:At.18559
UniProt:Q93VK0
Coordinates (TAIR10) chr3:+:1221546..1222456
Molecular Weight (calculated) 31200.50 Da
IEP (calculated) 4.88
GRAVY (calculated) -0.16
Length 278 amino acids
Sequence (TAIR10)
(BLAST) 		001: MTREFELENN YQLCDEIGRG RFGTITRCFS PATKEFYACK TIDKRVLIDA LDRECIETEP RIMAMLPPHP NIIRIFDLYE TEDSLAIVME LVDPPMTIYD
101: RLISAGGRLS ESESASYAKQ ILSALAHCHR CDVVHRDVKP DNVLVDLVSG GVKLCDFGSA VWLGGETAEG VVGTPYYVAP EVVMGRKYDE KVDIWSAGVV
201: IYTMLAGEPP FNGETAEDIF ESILRGNLRF PPKKFGSVSS EAKDLLRKMI CRDVSRRFSA EDALRHSWMM NVGNLQSN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)