AT3G03680.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.666 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : C2 calcium/lipid-binding plant phosphoribosyltransferase family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phosphoribosyltransferase C-terminal (InterPro:IPR013583), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (TAIR:AT1G74720.1); Has 14333 Blast hits to 8916 proteins in 1075 species: Archae - 59; Bacteria - 2640; Metazoa - 3947; Fungi - 1236; Plants - 1682; Viruses - 124; Other Eukaryotes - 4645 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:907624..910677 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 114272.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.03 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.42 | ||||||||||||||||||||||||||||||||||||
| Length | 1017 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MADNVLRKLI VEICSARNLM PKDGQGTASA YAIVDFDGQR RRTKTKFRDL NPQWDEKLEF FVHDVATMGE EILEINLCND KKTGKRSTFL GKVKIAGSAF 0101: ASAGSETLVY YPLEKRSVFS QIKGEIGLKA YYVDENPPAA PAATEPKPEA AAATEEKPPE IAKAEDGKKE TEAAKTEEKK EGDKKEEEKP KEEAKPDEKK 0201: PDAPPDTKAK KPDTAVAPPP PPAEVKNPPI PQKAETVKQN ELGIKPENVN RQDLIGSDLE LPSLTRDQNR GGGYDLVDRM PFLYIRVAKA KRAKNDGSNP 0301: VYAKLVIGTN GVKTRSQTGK DWDQVFAFEK ESLNSTSLEV SVWSEEKIEK EDKTTTTTES CLGTVSFDLQ EVPKRVPPDS PLAPQWYTLE SEKSPGNDVM 0401: LAVWLGTQAD EAFQEAWQSD SGGLIPETRS KVYLSPKLWY LRLTVIQTQD LQLGLGSEAK SKIPTTELYV KAQLGPQVFK TARTSIGPSA SSSGSGNPTW 0501: NEDLVFVASE PFEPFLIVTV EDITNGQSIG QTKIHMGSVE RRNDDRTEPK SRWFNLAGDE KKPYSGRIHV KVCLEGGYHV LDEAAHVTSD VRPSAKQLAK 0601: PPIGLLEVGI RGATNLLPVK TRDGTRGTTD AYVVAKYGPK WIRTRTILDR FNPRWNEQYT WDVYDPCTVL TIGVFDNGRY KRDESGKQGR DVRVGKIRVR 0701: LSTLDMNRIY LNSYTLTVIL PSGAKKMGEV EIAVRFSCPS WLSIIQAYVT PMLPRMHYVR PLGPAQQDIL RHTAMRIVTA RLARSEPPLG QEVVQYMLDT 0801: DNHVWSMRRS KANWFRVITF LSRAATIARW IHGIRTWVHP PTTVLVHLLL VAIVLCPHLV LPTVFMYAFL ILALRFRYRG RVKVNSVDPR LSCVDSVAPD 0901: ELDEEFDGFP TTRQPEVVRI RYDRLRALAG RAQTLLGDVA AQGERVEALF NWRDPRATCI FVVFCLFASF LFYIVPFKVF LLGSGFYYIR HPRFRDDMPS 1001: VPVNFFRRLP SMSDQIL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)