AT2G45580.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.611 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 76, subfamily C, polypeptide 3 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP76C | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 76, subfamily C, polypeptide 3 (CYP76C3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 76, subfamily C, polypeptide 4 (TAIR:AT2G45550.1); Has 33927 Blast hits to 33635 proteins in 1732 species: Archae - 48; Bacteria - 3873; Metazoa - 11973; Fungi - 7308; Plants - 9418; Viruses - 6; Other Eukaryotes - 1301 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:18782388..18784286 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 58146.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.35 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.06 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 515 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDLSLIQGMS LPLYFLLTLF FFFFATAKTR RSSSTGTLPP GPPILPLVGN IFQLGFNPHR SLAAFSKTYG PIMSLKLGRL TAVVISSPEA AKEALRTHDH 101: VMSARTFNDA LRAFDHHKHS IVWIPPSARW RFLKKTITKY LLSPQNLDAI QSLRMRKVEE LVSLVNEFRE RGEAIDLARA SFVTSFNIIS NALFSVDLAT 201: YDSNSSSYEF HNTVVHLTDI AGIPNVGDYF QYMRFLDLQG TRKKAVLCIE KLFRVFQEFI DARLAKRFSR TEKEPKEASS IDMLDSLLDL TQQNEAELTM 301: NDLKHLLLDV FVAGTDTNSS TMEWAMTELF RSTEKMVKAQ SEIRQVIGQN GFVQESDIPS LPYLQAIVKE TLRLHPAAPL IPRKSESDVQ IMGFLVPKNT 401: QVVVNVWAIG RDASVWENPM KFEPERFLLR ETDVKGRDFE LIPFGSGRRM CPGISMALKT MHMVLASLLY SFDWKLQNGV VPGNIDMSET FGLTLHKAKS 501: LCAVPVKKPT ISSSY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)