AT2G32540.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.627 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cellulose synthase-like B4 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes a gene similar to cellulose synthase | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cellulose synthase-like B4 (CSLB04); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups, transferase activity; INVOLVED IN: cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like B3 (TAIR:AT2G32530.1); Has 2375 Blast hits to 2288 proteins in 474 species: Archae - 7; Bacteria - 756; Metazoa - 0; Fungi - 5; Plants - 1590; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:13814686..13818289 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 84990.80 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.42 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.01 | ||||||||||||||||||||||||||||||||||||||||
| Length | 755 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAESSSPLPP LCERISHKSY FLRAVDLTIL GLLLSLLLYR ILHVNQKDTV WIVAFLCETC FTFVWLLITN IKWSPADYKT YPERLDERVH ELPPVDMFVT 101: TADPVREPPL IVVNTVLSLL AVNYPANKLA CYVSDDGCSP LTYFSLKEAS KFAKIWVPFC KKYNVRVRAP FMYFRNSPEA AEGSEFSKDW EMTKREYEKL 201: SQKVEDATGS SHWLDAEDDF EAFLNTKSND HSTIVKVVWE NKGGVGDEKE VPHVVYISRE KRPNHFHHYK AGAMNFLVRV SGLMTNAPYM LNVDCDMYVN 301: EADVVRQAMC IFLQKSMDSN HCAFVQYPQD FYDSNVGELT VLQLYLGRGI AGIQGPQYAG SGCFHTRRVM YGLSLDDLGD DGSLSSIATR KYLAEESLTR 401: EFGNSKEMVK SVVDALQRKP FPQKNLKDSL ETAQEMGHCH YEYQTSWGKN IGWLYDSTTE DVNTSIGIHS RGWTSSYIFP DPPAFLGCMP QGGPEVMVQQ 501: RRWATGLLEI LFNKQSPLIG MFCRKIRFRQ SLAYLYVFSW GLRSIPELFY CLLPAYCLLH NSALFPKGVY LGIIITLVGI HCLYTLWEFM NLGFSIQSWY 601: VTQSFGRIKT TCSWLFSVLD VILKLLGISK TVFIVTKKTM PETKSGSGSK KSQREVDCPN QDSGKFEFDG SLYFLPGTFI VLVNLAALAG CLVGLQSRGG 701: GGSGLAEACG CILVVILFLP FLKGMFEKGK YGIPFSTLSK AAFLAALFVV LSVGN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)