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AT2G32320.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.675
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : tRNAHis guanylyltransferase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
tRNAHis guanylyltransferase; CONTAINS InterPro DOMAIN/s: tRNAHis guanylyltransferase (InterPro:IPR007537); BEST Arabidopsis thaliana protein match is: tRNAHis guanylyltransferase (TAIR:AT2G31580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4021eggNOG:KOG2721EMBL:AK227925EnsemblPlants:AT2G32320
EnsemblPlants:AT2G32320.1entrez:817793ExpressionAtlas:Q0WSK3GO:GO:0000287
GO:GO:0006400GO:GO:0008193hmmpanther:PTHR12729hmmpanther:PTHR12729:SF6
HOGENOM:HOG000084111InterPro:IPR007537InterPro:IPR024956InterPro:IPR025845
PANTHER:PTHR12729PaxDb:Q0WSK3Pfam:PF04446Pfam:PF14413
STRING:3702.AT2G32320.2TMHMM:TMhelixUniProt:Q0WSK3
Coordinates (TAIR10) chr2:+:13727938..13731428
Molecular Weight (calculated) 61200.80 Da
IEP (calculated) 7.74
GRAVY (calculated) -0.38
Length 525 amino acids
Sequence (TAIR10)
(BLAST)
001: MANSKYEYVK SFEVEDEVMF PNLIIIRIDG RDFSRFSQVH KFEKPNDETS LNLMNSCASS VLVEYPDIVF AYGYSDEYSF VFKKASRFYQ RRASKILSLV
101: ASFFAAVYVT KWKEFFPHTK LEYAPSFASK VVSCASVEVL QAYLAWRQHD CHISNQYDTC LWMLVKSGKT LSETQEILKD TQKQQRNELL FQQFGINYKM
201: LPVLFRQGSC LFKTKLEETV KHDENGKPVK RLRRRETLVH SENVAGRSFW NEHSSLHKDL GHFAKDIGKI EPDYVKSFQF ESRLLPLTWV VVRIDGCHFH
301: RFSEVHEFEK PNDEQALKLM NSCAVAVLEE FQDIAFAYGV SDEFSFVLKN KSELYKRQSS KIISAVVSFF TSTYMMRWGD FFPHKKLKYP PSFDGRAVCY
401: PTSDILLDYL AWRQVDCHIN NQYNTCFWML VKSGKSKIQA QDYLKGTQTR EKNELLSQQF GIEYNSLPVI FRMGSSVFRL KTQEGVTEEN GEVSGKQVEA
501: EVGVDYSNII DQCFWQQHPH ILSFS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)