AT2G04235.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 713 Blast hits to 345 proteins in 122 species: Archae - 2; Bacteria - 262; Metazoa - 138; Fungi - 55; Plants - 39; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:1449414..1455018 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 137921.00 Da | ||||||||||||||||||||||||
| IEP (calculated) | 5.74 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.55 | ||||||||||||||||||||||||
| Length | 1253 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MASEKPEDPM NNTAGIGTDE ESIAQRRKRL RRVSFADREI TSVHIFNRDE DYETPPNTSA AKPQNGGDTS EPDEDNKVIR FFGELSDRED TDGDGDGEYE 0101: PILDKSFLRP KYSPSSGGST VGSATSDNGT LQLLCEFRVL FFEFLAESIL FSLPEDNFFG PVSSHFINPG RLLDTPISEE HHEMTMDSTA FSMHFRSLAR 0201: SESGDVRTPT SSHLLVEEKT PTEVTSRSDT GSAMVLTEPK KLFPKSPVPV DKGSGGRDSN DMSIVGENSR RYDYGYLSPT LAALMGDESK ELLPEDNTVE 0301: ARSPIDDFSS SLPNGCIPIG LQESGSQRYT KEASLSSSTI RRQSAFLVGM LPQSLSCVTP SPTQGGSFMS RETRALVESL STIQKSKSRL GLIPPSPGSA 0401: LSQRIEKSKL QLSGHRFLTT PSIGREEIGV LRDKHADIPI TNLEALLSKH DNRTPISEEK SMPDKCISGA LSHAVDTSDD NRTPVPEEKG IPDQCISGAL 0501: SHAVDTSDDN KTPVPEEKGI PDQCSSGALN PAVDTSDDNR TPVQEKKGLP DQCSSGALSP AVDTSDDRPP VSEKKGIPDQ HSCGALIPAV DISDVFARRS 0601: PEGNTNSEIE GSLLCKQQQR NQAASTPEKF VSSPTNLSNA TTSASENFVP LQDQEQHSKD IEKSETGDGN VTKEYASNCS MNTLSEKVDS LLAESSVLLT 0701: DTGFLNGSAQ QREKDSVRNK KQNRTNISAA HILLKDNNPF KVHCETEVIS AEDFTAVAKE NLPSTSGSSS VDRSKNEASH AKGPSRLKRK AEDVDCAARN 0801: CSPKVERSTK YISNSVMEHP DGNIDANDCR RVREQVNWVE IPGKVSKEIN QMLAPLADKL NSRLICKLED ILTHMKKVHL CEMLCLQIQS QKVCDHLSGA 0901: KTKRRVESRS LLCKLAYDKA KLELLHLKKE IMMKKFQAVS TGVQTSETLR LNCANFLRQH GFRSTGLLNP DQAQEVIITG KRAEITQEIK EIDSKIKNLI 1001: QCFTACDTMT GPQPAYADTI MIAEETLKKR MSCRSLRQDI LIWKVDSLGE WNDCQSIVLN YSGVFNQRLT LKPGHPSCVL VSNSLSDTFV KHFPEMNVSI 1101: AFNSMFNAED SRRYIGGSNT LLEITQKTSL LLHNLLDVAE EFHLAQMNIP NLVQGNFDSP SAEQLHLQIS FLDCTNLRKL SVILDVTCLI HGKYPSDVVP 1201: CEFRKVSGTK RDGVVSKQLK KEIESTIDDV GVGYPRILRL CRCISKALQS EKR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)