AT1G74790.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : catalytics | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
catalytics; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Soluble quinoprotein glucose/sorbosone dehydrogenase (InterPro:IPR011041), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: hipl2 protein precursor (TAIR:AT5G62630.1); Has 3691 Blast hits to 3691 proteins in 820 species: Archae - 60; Bacteria - 1937; Metazoa - 139; Fungi - 4; Plants - 281; Viruses - 0; Other Eukaryotes - 1270 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:+:28098912..28101673 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 75228.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.15 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 695 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKLHQFLVFL FLFLSCFALS SWALPLCSDS RAPSEVNSTL SFCPYKGKTC CNTMKDTSLM KQFQAMNISD KGCASVVKSI LCANCDPFSS DLFRDNSDQQ 101: SVPILCNSTS SANSTENFCS ETWETCQNVS ISGSLFAASL QGRAGAPSNK NASKLADLWQ SKTDFCSAFG GASSNETVCF SGEPVALNDN DTTPDKPPSG 201: ICLEKIGNGS YLNMVPHPDG SNRAFFSTQP GIVFLAGIPD QDSGGVLDVD PSSPFVDMTD EIHFDTEFGM MGMAFHPKFA QNGRFFASFN CDKSKWPGCT 301: GRCSCNSDVN CDPSKLTPDS GSQPCQYQTV IAEYTANSTS SDPSKAKNAK PTEVRRIFTM GLPFTSHHAG QILFGPDGYL YFMMGDGGGG ADPYNFAQNK 401: KSLLGKIMRL DVDNIPSASE ISKMGLWGNY SIPKDNPFRE DKELEPEIWA VGLRNPWRCS FDSSRPSYFM CADVGQDTYE EVDLISKGGN YGWRVYEGPD 501: LFHPESSPGG NTSVKSLNPI FPVMGYNHSE VDSSGKSASI TGGYFYRSET DPCIAGRYVY ADLYGNGVWA GIETPANSGS FVTKRTTFSC ASDSPMKCSD 601: SPGTSGLSLG YVFSFGEDNN KDIYLLTSNG VYRVVRPSRC NLTCSKENST ARRNPGTSSS PSSSSSSCYK HINGFHGSLV VLFVSLSLIL LGLLN |
||||||||||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)