AT1G67420.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.982 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Zn-dependent exopeptidases superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Zn-dependent exopeptidases superfamily protein; FUNCTIONS IN: peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M28 (InterPro:IPR007484); BEST Arabidopsis thaliana protein match is: Zn-dependent exopeptidases superfamily protein (TAIR:AT5G20660.1); Has 1831 Blast hits to 1821 proteins in 500 species: Archae - 17; Bacteria - 819; Metazoa - 494; Fungi - 278; Plants - 79; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:25255411..25260358 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 96995.70 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 6.24 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.29 | ||||||||||||||||||||||||||||
| Length | 872 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPFWKMSARD VTGFKFLFSL VFIYALMSAI VYSVLHMKFI SPLPANAPLE RFSEARAVEH IRVLAEEIDG RQEGRPGLKE AATYIKSQLE MVKERAGPNL 101: RVEVEETQVD GSFSMMFLGH SISLGYRNHT NILMRISSMN SLDTDASVLM NAHYDSPVNS PGAGDCGSCV ASLLELARLV VDSGWVPPQP VIFLFNGAEE 201: LFMLGSHGFM TKHKLKDTIG AFINVEASGT GGIDLVCQSG PGSWPSYVYS QAAVYPMAQS SAQDVFPVIP GDTDYRMFAE DYADIPGLDI IFLLGGYYYH 301: TTFDTVDRIV PGSMQARGEN LISVLKAFAS SSRLKVASER KTLDVDANSD MVERAVFFDY LTWFMVFYPR RVAFVLHNIP AALFLCVPFF LYMMDPRTHP 401: LLSFFWAFFK GVMHHFAGIL LGVIVPVLFA VIRLFFAYPM SWFAHSYLAF LMFIPCSFFG LLIPRAISDR VSHFQGVSSK KIMKEPSDEA RFWGAFGFYA 501: FATSAYFFAG LNGGFMTFVI SISMLLGWIA FYLSVKSYGY NSIKSPMFYV IALVPCLLYS LYFGGILTLL LIEKTGMMGA IPPPYGFYLA DVAVAAVIGI 601: VTGLCLGPII PICDRWLAKS SILKFLLHFT VVMLAVSSQF FPYSKDAPKR VVLQHTFIST GGNEITGSSY DLAVIDSNSM EFIFKHAPEV AKELHVGPSF 701: SLGNAEASPQ EAWMALFPIS CVLTTNGRFP AKANNILERY SQFPLLQAHK PQTTFENGTR RVHLELSLGS LEEIWVTVLN ITGPLSGWSF ADGKPPAPEL 801: PPGGPPSYIL RLSGNSDEKW NFWLEASSEE EVRVDVAVLD QRLDEETIHL KGLFPKWSDV IAYTSFLSTY LF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)