AT1G65710.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G37010.1); Has 2241 Blast hits to 1776 proteins in 164 species: Archae - 0; Bacteria - 29; Metazoa - 1759; Fungi - 94; Plants - 93; Viruses - 17; Other Eukaryotes - 249 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:24437057..24438424 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 50024.70 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.55 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.93 | ||||||||||||||||||||||||||||||||
| Length | 455 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGCCLSKKPS PSLPSSVKPS DPIKPMEPVI EPLEEEAKPK SEKLNQEEEE EEVVVIKHTR SHEERSKKTE SDKDSPVSSP VAAEKSNSTP LVRISSCTKE 101: EVDAILIQCG KLSRSNSAAK TRRYSGSKRS FDFDQNERIR GGDAAEEDGM QRNRHRGVER VHGSPRERRR RTPSRERERS GSRERGNVGG GGGGSRRVSR 201: SPAKRSEIRN ADSCGSSVNS SNNRPGKFVT IPATDKSNNV EPLVKRITVK RNIGDACRIA ASPRSKSPAR AGNNVPSLSR SNSRKAEQSP YRRNPLGEID 301: QNTKKMIESV KPNSRTSRGP SPSRVAVVEL TKAPQVVLSR SRSLRKSRDF DLVSNEDNNY TALLLKDIQS FHGKSVDDSV ISLPLCVSKA CSIVEAVADL 401: NSMTNRTCLR SDSSRFRFTS TVKKADLMEP SFEKYVTVKR GGGSLEESSG SNNVT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)