AT1G62760.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.637 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Plant invertase/pectin methylesterase inhibitor superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; EXPRESSED IN: stem, sepal, male gametophyte, carpel, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT4G25260.1); Has 159593 Blast hits to 71095 proteins in 2447 species: Archae - 190; Bacteria - 21282; Metazoa - 60358; Fungi - 27926; Plants - 19068; Viruses - 4324; Other Eukaryotes - 26445 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:23237574..23238512 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 32355.90 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.67 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.11 | ||||||||||||||||||||||||||||||||
| Length | 312 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNILSQTQIL HLSIAILLFI TTSSSSLSPS SSSPSLSPSP PSSSPSSAPP SSLSPSSPPP LSLSPSSPPP PPPSSSPLSS LSPSLSPSPP SSSPSSAPPS 101: SLSPSSPPPL SLSPSSPPPP PPSSSPLSSL SPSSSSSTYS NQTNLDYIKT SCNITLYKTI CYNSLSPYAS TIRSNPQKLA VIALNLTLSS AKSASKFVKN 201: ISHGGGLTRL EVVAVADCVE EIGDSVTSLQ DSIRELDSIN YKDSAKFEMV MSDVETWVSA ALTNDDTCMD GFSLVKTAVK DLVRRHVVEV ARLTSNALAL 301: INMYASTQEN FS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)