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AT1G44608.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.985
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21830.1); Has 49 Blast hits to 49 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JS40eggNOG:ENOG4111A8MEMBL:AY954761EMBL:CP002684
EnsemblPlants:AT1G44608EnsemblPlants:AT1G44608.1entrez:841034GeneID:841034
Gramene:AT1G44608.1hmmpanther:PTHR35995HOGENOM:HOG000077589InterPro:IPR008004
KEGG:ath:AT1G44608OMA:ACHLSAKPfam:PF05340PhylomeDB:Q58G48
Proteomes:UP000006548RefSeq:NP_175093.2TAIR:AT1G44608UniGene:At.70698
UniProt:Q58G48
Coordinates (TAIR10) chr1:-:16875249..16876258
Molecular Weight (calculated) 20368.40 Da
IEP (calculated) 10.59
GRAVY (calculated) -0.61
Length 176 amino acids
Sequence (TAIR10)
(BLAST)
001: MKGQNKSSTS SCNIHPVDVI EGVCPLCLNE RLLVVASLQR LRPPCPPSSY QTIPKTILQN SSRKKPIRLF SFFSFFELRH HKSDHQNTSI ISPEDSFISI
101: NFEDNRATSW EKGKETQYQH VHTKKEFVPQ STPLPPLLSW RKRIRRLLHV ISFKSRSRAC HLSAKVKSED DLSRSW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)