AT1G29890.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.977 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : O-acetyltransferase family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
O-acetyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cas1p-like (InterPro:IPR012419); BEST Arabidopsis thaliana protein match is: O-acetyltransferase family protein (TAIR:AT2G34410.2); Has 271 Blast hits to 269 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 41; Plants - 106; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:10464491..10467153 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 55550.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.09 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.41 | ||||||||||||||||||||||||||||||||||||
| Length | 470 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFSSHNIFLT IGIVFIRRFL TLEDSFLLEN RATLRAMAEF GAILLYFYIC DRTSLIGQSQ KNYSRDLFLF LFCLLIIVSA MTSLKKHTDK SPITGKSILY 101: LNRHQTEEWK GWMQVLFLMY HYFAAVEFYN AIRVFIAGYV WMTGFGNFSY YYIRKDFSLA RFTQMMWRLN FFVAFCCIIL NNDYMLYYIC PMHTLFTLMV 201: YGALGIYSQY NEIASVMALK IASCFLVVIL MWEIPGVFEI FWSPLAFLLG YTDPAKPDLP RLHEWHFRSG LDRYIWIIGM IYAYFHPTVE RWMEKLEECD 301: AKRRMSIKTS IIGISSFAGY LWYEYIYKLD KVTYNKYHPY TSWIPITVYI CLRNCTQQLR RFSLTLFAWL GKITLETYIS QFHIWLRSSV PNGQPKLLLS 401: IIPEYPMLNF MLTTAIYVLV SVRLFELTNT LKSVFIPTKD DKRLLHNVIA MAAISFCLYI IGLILLLIPH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)